Gene
| Gene Model ID | pfu_aug2.0_39.1_30058 |
|---|---|
| Locus | scaffold39.1 : 430187 ... 454484 : - |
| To GenomeBrowser | scaffold39.1:430187..454484 |
| Genes list of scaffold | scaffold39.1 |
| Synonym | pfu_aug1.0_2625.1_30186 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_39.1_30058.t1 | 2 | 1 | Serinc | 63 | 177 | 0.0 | 299.9 | 2.9e-27 | 1.1e-23 | 83.7 |
| pfu_aug2.0_39.1_30058.t1 | 2 | 2 | Serinc | 185 | 480 | 0.0 | 299.9 | 0.0 | 0.0 | 221.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_39.1_30058.t1 | gi|524880471|ref|XP_005096899.1| | PREDICTED: serine incorporator 5-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_39.1_30058.t1 | gi|676477725|ref|XP_009061197.1| | hypothetical protein LOTGIDRAFT_165915 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_39.1_30058.t1 | gi|558144336|ref|XP_006119216.1| | PREDICTED: serine incorporator 5 isoform X1 [Pelodiscus sinensis] | 0.0 |
| pfu_aug2.0_39.1_30058.t1 | gi|81863249|sp|Q63175.1|SERC5_RAT | Serine incorporator 5 | 0.0 |
| pfu_aug2.0_39.1_30058.t1 | gi|620956171|ref|XP_007660477.1| | PREDICTED: serine incorporator 5 [Ornithorhynchus anatinus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_39.1_30058.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_39.1_30058.t1 atgctacaactgatactgcagctgatactgctattgaagctatgtactcgtgatgatgctgcttatcttgatgctacaac tgggggtgacgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatg atgatgatgatgatgcgattctaaaatgttggtgtggccctgcctcttgcggtctttgctgcaggtgtctaccacaaatc aacgagtccacgggcacccgtatcatgtacaccatcttctttgttgtgggatttcttgttgcatgtctgatgttgtcacc agatctggaggatgcgttagctgaacacgttccccagttcaaccatacctgtgtgacgttaatggcaggagagaagtgta gtcgactgacaggatatcaagcggtgtatagactgtgtttggggatggtagctttcagtgtgataatgatgctcgttact atgtgtgtccattcaagctcatactgtaggggaggaatacataatggggttggaacaaaaacgggagaaccaagtaaaat tggatactgtggtacactattttttgctattctattttacatcattagtatagctgcggtcttcatgctttatttgaagt acacaagttgggatggatgtcttcataacaaagtttttataggagtaaatgcaggactgtgtattttactgtctgtgatc agcataattcctggagttaccaagttcaaccctaacgttggtatacttcaggcctcaatcatcaccacttacgtcatata cttgacatgggcagcactatccagtgaaccaccagaggaaatctccatcttagaaacagtacgtgttcagtttcttgctc tatatgataaagactctgagaagaagaaacacgatgatatgatgacggtagagggaccagacgagaatttccatgttaaa tctaacacgacagctactatgtgccaccccatgccgtcattccctcacagtgatctgatagcggcctatgctggactgct catcatgttcattatggctgtatactcaagcttacagacatcggtagtgtcacatagactgggtataaggagacaaggtc tacctaaagctgcatatgaatgtttttgctgctgccctgttacagcaagggctaatcactcggagaaaggaggtcagaga gttgagtataatgaagccagacatacccagtataattatgccttcttccactttatgttctgtcttgccagtctctacgt catgatgcagctaactaattggtacaggccacaagagtctgacctgaacaagtttggtttgaactggtcagcagtttggg tgaaaatggcctccagctgggcttgtgtggtcatttatatatggacactgttcatacctaagtgctgccctggtcgtgac ctgaccttcatgagaaggtcatccactaggagatctgaggacgaggcagatggagaagcggagagaaaaccaggaaaaca gggtgctctggaattagtgaacaggacagtagttatatatgtgtattgtaataacgttgactaa |
|
Protein
| Protein ID | pfu_aug2.0_39.1_30058.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_39.1_30058.t1 MLQLILQLILLLKLCTRDDAAYLDATTGGDDDDDDDDDDDDDDDDDDDDDDDDDDDDDAILKCWCGPASCGLCCRCLPQI NESTGTRIMYTIFFVVGFLVACLMLSPDLEDALAEHVPQFNHTCVTLMAGEKCSRLTGYQAVYRLCLGMVAFSVIMMLVT MCVHSSSYCRGGIHNGVGTKTGEPSKIGYCGTLFFAILFYIISIAAVFMLYLKYTSWDGCLHNKVFIGVNAGLCILLSVI SIIPGVTKFNPNVGILQASIITTYVIYLTWAALSSEPPEEISILETVRVQFLALYDKDSEKKKHDDMMTVEGPDENFHVK SNTTATMCHPMPSFPHSDLIAAYAGLLIMFIMAVYSSLQTSVVSHRLGIRRQGLPKAAYECFCCCPVTARANHSEKGGQR VEYNEARHTQYNYAFFHFMFCLASLYVMMQLTNWYRPQESDLNKFGLNWSAVWVKMASSWACVVIYIWTLFIPKCCPGRD LTFMRRSSTRRSEDEADGEAERKPGKQGALELVNRTVVIYVYCNNVD |
|