Gene
| Gene Model ID | pfu_aug2.0_39.1_30060 |
|---|---|
| Locus | scaffold39.1 : 467148 ... 472274 : - |
| To GenomeBrowser | scaffold39.1:467148..472274 |
| Genes list of scaffold | scaffold39.1 |
| Synonym | pfu_aug1.0_2625.1_30184 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_39.1_30060.t1 | 1 | 1 | ATG27 | 226 | 269 | 5.9e-07 | 28.9 | 1.4e-10 | 1.0e-06 | 28.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_39.1_30060.t1 | gi|676423312|ref|XP_009044093.1| | hypothetical protein LOTGIDRAFT_228086 [Lottia gigantea] | 4.0e-28 |
| pfu_aug2.0_39.1_30060.t1 | gi|524864812|ref|XP_005089240.1| | PREDICTED: uncharacterized protein LOC101860291 [Aplysia californica] | 4.0e-17 |
| pfu_aug2.0_39.1_30060.t1 | gi|196002101|ref|XP_002110918.1| | predicted protein [Trichoplax adhaerens] | 5.0e-14 |
| pfu_aug2.0_39.1_30060.t1 | gi|585704118|ref|XP_006823390.1| | PREDICTED: uncharacterized protein LOC102809854 [Saccoglossus kowalevskii] | 1.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_39.1_30060.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_39.1_30060.t1 atgaatttagataggagggcttttatcatacaatatccacttaagttatcaatattgcctctcatcatcagtatcatcag tattatacacaatgaaagtcccgtgatagctgaagatcaatgtaaatcgcctcagggaatcgacatcaccattttgaaac aaggaatatggagtttcagcagcaaaacaggctgtctgggagtgaacaccacatctccattttcaaactgtacgatatcc atatcattctgtcagcctttaccggcaaactggtgtggacaacagtcaaatgatcttagtgtttgtgttaaaaccttcaa tggcactggacagaatgaaaccatatcttatgctggagggagcttcaatccacagccattcgcattagattttaccatcg gaggagggttccaagccacttttggtgccacgccttacaccccacctggtggatcagctaccaatatcacatcacaggca atgtttatatgtaaccagaattcagtatggtcaccggctctcataggatctataaataacacaatcccagacatcgcaaa acctagtattgttttcaaagatggtcatagcttatcaatgacttttgagtactacggagcatgtgtcactttaacaccag cagaaaaattgaaccttctcagtgcaggatcagttctaatcataatattttttgtcagtttgactatctactttttattt ggatctgtctttaactattgccgtggttacaggggaaaggatgtgattccccaatcagaattctgggttgacttgccagt attagttgcagtaagtatgatatag |
|
Protein
| Protein ID | pfu_aug2.0_39.1_30060.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_39.1_30060.t1 MNLDRRAFIIQYPLKLSILPLIISIISIIHNESPVIAEDQCKSPQGIDITILKQGIWSFSSKTGCLGVNTTSPFSNCTIS ISFCQPLPANWCGQQSNDLSVCVKTFNGTGQNETISYAGGSFNPQPFALDFTIGGGFQATFGATPYTPPGGSATNITSQA MFICNQNSVWSPALIGSINNTIPDIAKPSIVFKDGHSLSMTFEYYGACVTLTPAEKLNLLSAGSVLIIIFFVSLTIYFLF GSVFNYCRGYRGKDVIPQSEFWVDLPVLVAVSMI |
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