Gene
| Gene Model ID | pfu_aug2.0_39.1_30062 |
|---|---|
| Locus | scaffold39.1 : 577235 ... 593906 : + |
| To GenomeBrowser | scaffold39.1:577235..593906 |
| Genes list of scaffold | scaffold39.1 |
| Synonym | pfu_aug1.0_1037.1_58345 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_39.1_30062.t1 | 1 | 1 | Peptidase_C2 | 20 | 313 | 0.0 | 322.9 | 0.0 | 0.0 | 322.6 |
| pfu_aug2.0_39.1_30062.t1 | 1 | 1 | Calpain_III | 333 | 477 | 6.1e-28 | 97.3 | 1.9e-31 | 1.4e-27 | 96.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_39.1_30062.t1 | gi|676439113|ref|XP_009048751.1| | hypothetical protein LOTGIDRAFT_112339 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_39.1_30062.t1 | gi|51011085|ref|NP_001003501.1| | calpain-9 [Danio rerio] | 0.0 |
| pfu_aug2.0_39.1_30062.t1 | gi|432952482|ref|XP_004085095.1| | PREDICTED: calpain-9 [Oryzias latipes] | 0.0 |
| pfu_aug2.0_39.1_30062.t1 | gi|551517891|ref|XP_005810445.1| | PREDICTED: calpain-9-like, partial [Xiphophorus maculatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_39.1_30062.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_39.1_30062.t1 atggaccagacatgcacgtttcggaggccgagaactggtaaaacagaaggaaatggattgtttgtagatccagactttcc cccggaacattcctccatattcaaacataaacctgtccccaaagacattatctggaaaaggccccatgaaatatcccaga accctgtactggtatctgacgggactagccgccatgacatgaaacaaggggagttaaataactgctggttcttatcaacg ctttctgccatagctgaaaaagacgaactaatagacaagattatccctgctgataacacttttggtacgactgcttacaa tggaaaatttcactgtcgtttctggcagtttgaccagtgggttgatatatacatagatgatctccttcccactgttaacg gccaaatattgtttgctcactcatcagacccgaatgaattctgggtttccctagtagaaaaagcctatgcaaaacttaac aaatcctacgaagccctggagtacggatttgaggctgatgccttcacagacctgacaggaggcttagccgagtggtacaa tcctgcagatctcaaggagcacgagttttacctaatccgggcagcctatcaatgcggtgctgtcattggatgtcttagtg tcgataaagagggaagagacgagcgtgagaagagagggatggtctccaatcattcttatgttataacaggggtagaagaa ataccatttaaatcaggaacggccaaactgatacgtgtcagaaacccgtggggtgatacggaatggaacggggcgtggtc agacggtggagaggaatgggagaaggttcctgaatacgtcaaggagttgttagaagtgacgtcaagagatgacggagagt tctggatgaactataatgactttaggagtgaatattgcaacatgattgtatgtaatctgtccccggactttgatcacgat ggaatcagtgacaaagcagattatcagatcaatctaagaggtcgctggcgatctaactttaatgctggaggttggttaga atgcgattcattcttcaaaaacccacagtaccttatcacaatgcaccccgatgtgtctgtacaaagaagatttaacggtc gacttcctctggtggtgtctctattacaagtgtaccacagacacgaaaaactagagggcgtggggctgaacgccatcggt ttcgagatctttcagcttttcaacaaaccaggaacagctctagggaaacatttctttgacaatatggatccattaatgcc agagaatgaggagacttatgcggaataccgcgagacatccgggcgttttttcctagacccgggacaatatatccttgtgc caacaactcagatgccaaagcaaagcagagactaccttatgagggtattctctgttagtaaaatggagtgcagtccatta gcaaactgtgaaaactgggaaaggtga |
|
Protein
| Protein ID | pfu_aug2.0_39.1_30062.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_39.1_30062.t1 MDQTCTFRRPRTGKTEGNGLFVDPDFPPEHSSIFKHKPVPKDIIWKRPHEISQNPVLVSDGTSRHDMKQGELNNCWFLST LSAIAEKDELIDKIIPADNTFGTTAYNGKFHCRFWQFDQWVDIYIDDLLPTVNGQILFAHSSDPNEFWVSLVEKAYAKLN KSYEALEYGFEADAFTDLTGGLAEWYNPADLKEHEFYLIRAAYQCGAVIGCLSVDKEGRDEREKRGMVSNHSYVITGVEE IPFKSGTAKLIRVRNPWGDTEWNGAWSDGGEEWEKVPEYVKELLEVTSRDDGEFWMNYNDFRSEYCNMIVCNLSPDFDHD GISDKADYQINLRGRWRSNFNAGGWLECDSFFKNPQYLITMHPDVSVQRRFNGRLPLVVSLLQVYHRHEKLEGVGLNAIG FEIFQLFNKPGTALGKHFFDNMDPLMPENEETYAEYRETSGRFFLDPGQYILVPTTQMPKQSRDYLMRVFSVSKMECSPL ANCENWER |
|