Gene
| Gene Model ID | pfu_aug2.0_392.1_07445 |
|---|---|
| Locus | scaffold392.1 : 51108 ... 67425 : - |
| To GenomeBrowser | scaffold392.1:51108..67425 |
| Genes list of scaffold | scaffold392.1 |
| Synonym | pfu_aug1.0_9934.1_31853 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| kidney mitochondrial carrier protein 1-like | GO:0006839 GO:0016021 GO:0031966 GO:0055085 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_392.1_07445.t1 | 3 | 1 | Mito_carr | 4 | 97 | 0.0 | 233.5 | 7.0e-25 | 3.5e-21 | 74.7 |
| pfu_aug2.0_392.1_07445.t1 | 3 | 2 | Mito_carr | 101 | 190 | 0.0 | 233.5 | 2.2e-26 | 1.1e-22 | 79.5 |
| pfu_aug2.0_392.1_07445.t1 | 3 | 3 | Mito_carr | 198 | 296 | 0.0 | 233.5 | 5.4e-26 | 2.7e-22 | 78.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_392.1_07445.t1 | gi|524910438|ref|XP_005110096.1| | PREDICTED: kidney mitochondrial carrier protein 1-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_392.1_07445.t1 | gi|524910434|ref|XP_005110095.1| | PREDICTED: kidney mitochondrial carrier protein 1-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_392.1_07445.t1 | gi|543339180|ref|XP_005516435.1| | PREDICTED: kidney mitochondrial carrier protein 1-like [Pseudopodoces humilis] | 0.0 |
| pfu_aug2.0_392.1_07445.t1 | gi|734642127|ref|XP_010749982.1| | PREDICTED: kidney mitochondrial carrier protein 1 [Larimichthys crocea] | 0.0 |
| pfu_aug2.0_392.1_07445.t1 | gi|704181353|ref|XP_010135518.1| | PREDICTED: kidney mitochondrial carrier protein 1 [Buceros rhinoceros silvestris] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_392.1_07445.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_392.1_07445.t1 atggataactggcgcccgtttgtttatggtggactcgcatcaatgacagcagaggctggaacttttcctattgataccac caagacacgcctacaaatccaaggtcagaagattgatgtcaaggtcacccaactcaagtacagaggaatgctgcatgccc tagttaccatagctagagaagagggaccaaaggcgttatatcagggaatttctcctgcattattaagacaagctacctac ggaaccattaaaattggtgtttatcattcattaaagagaatggtggtagaaaatcctaaagatgagacgttggtagttaa cgtagcctgtggtatagtggccggaatcgtctccagttctatagcaaatcccacagatgtgttaaaagtacgcatgcagg ctaatacggtaatggacgagaggacgtcaatgatgcgatcgtttataaatatatacaaacaggagggagtcaaaggattg tggaggggagtggtaccaacagcacagagggcagccattatagctggtgttgaattaccggtttatgatttctgtaagaa gtatattatacgatttgaggtgctaggtgataccatggtaacacattttatatctagtttctttgctggtctggctggtg caatattttctactccagtagatgtcgttaagactaggttgatgaatcagaagagacttaaaatgccggtacaaggcgga tcttcatcaactaatcctgtgatatataaatcatctatagattgtattatacagactgtgcggcatgaagggtttatggc attatataaaggatttgtaccatcctgggtaagactgggaccatggaatattatttttttcatgacatttgaacaattga agaagatttactag |
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Protein
| Protein ID | pfu_aug2.0_392.1_07445.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_392.1_07445.t1 MDNWRPFVYGGLASMTAEAGTFPIDTTKTRLQIQGQKIDVKVTQLKYRGMLHALVTIAREEGPKALYQGISPALLRQATY GTIKIGVYHSLKRMVVENPKDETLVVNVACGIVAGIVSSSIANPTDVLKVRMQANTVMDERTSMMRSFINIYKQEGVKGL WRGVVPTAQRAAIIAGVELPVYDFCKKYIIRFEVLGDTMVTHFISSFFAGLAGAIFSTPVDVVKTRLMNQKRLKMPVQGG SSSTNPVIYKSSIDCIIQTVRHEGFMALYKGFVPSWVRLGPWNIIFFMTFEQLKKIY |
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