Gene
| Gene Model ID | pfu_aug2.0_392.1_07446 |
|---|---|
| Locus | scaffold392.1 : 69533 ... 84515 : - |
| To GenomeBrowser | scaffold392.1:69533..84515 |
| Genes list of scaffold | scaffold392.1 |
| Synonym | pfu_aug1.0_9934.1_31854 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_392.1_07446.t1 | 1 | 1 | zf-C3HC4 | 11 | 49 | 7.0e-07 | 28.8 | 1.3e-09 | 1.9e-06 | 27.4 |
| pfu_aug2.0_392.1_07446.t1 | 1 | 1 | zf-C3HC4_2 | 11 | 49 | 8.7e-06 | 25.6 | 1.5e-08 | 2.2e-05 | 24.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_392.1_07446.t1 | gi|585721080|ref|XP_006813205.1| | PREDICTED: E3 ubiquitin-protein ligase RNF169-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_392.1_07446.t1 | gi|524871804|ref|XP_005092673.1| | PREDICTED: dentin sialophosphoprotein-like [Aplysia californica] | 2.00386e-43 |
| pfu_aug2.0_392.1_07446.t1 | gi|572309417|ref|XP_006620500.1| | PREDICTED: uncharacterized protein LOC102674756 isoform X1 [Apis dorsata] | 6.00036e-42 |
| pfu_aug2.0_392.1_07446.t1 | gi|571554621|ref|XP_006566135.1| | PREDICTED: uncharacterized protein LOC410198 isoform X1 [Apis mellifera] | 9.99967e-42 |
| pfu_aug2.0_392.1_07446.t1 | gi|755960233|ref|XP_011304671.1| | PREDICTED: E3 ubiquitin-protein ligase RNF169-like isoform X2 [Fopius arisanus] | 2.0e-40 |
Transcript
| Transcript ID | pfu_aug2.0_392.1_07446.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_392.1_07446.t1 atggatgagctaaatttggaggagtgtatctgtccaatatgcctgtgtatcctgatagagccggtaacgatgccttgtac acacacgctgtgttatctatgcttcacacagaacgtggaggataccagcctgtcatgtcccatgtgtagaaccaggatct ccaactgggcacgtcgagcggcaaaaaccaaaacattgatcaataaaaaactctgggaggacattcagcagtgctttcct gataaagtaaaaaaacgaatgaatgattgtgatgatgaggacttggaggatgctgtgttccatccaatgataaacatcgc ccaacctggagagatcagacaggagtttgaggcacagcttaaagagttggaaaaacaaagagaaatagagaggaggagag agcaagaggcgagtgaaaaattgatccgtaaactacaagaggaggaacagtggcagcaaagagaaaataaggaacgagag gaacaggatttggttctggcacagcagttgtctaaagagaaagaaaaggataaccttcaagatgataatcttcaagttgg aaaacggcagggaacaagatgtttatcctctttgtcaacatcacagagtctcactgacagcagaccatcatcaacgatcg attctctgatcaacaagatgagagaagctgagcgtctcaaggaggaagacagaagagaaaattcaccccaggttttatct ccgttcaaatacaagtgtaaaaccccaagtgatataatggtagatttgactgaatgtggtagatcatcaaaatcgagggg ttcatctattgtggaagtcggaagtaataacagctccgttatgagcctaaagaatgattgtgaagttcaagtaatgatgg acatggataaaatcataaccatgccgttatcgataagttcaagggaaagttcaaatgacatgatcacaccagacaatagt aaagagattgtgaggggaggagtgtcggatacgttacgatgtaggagcaccgatagctcagacagtatcgatggcgagtt gcgacattttaaaccaatcagatcttgtcctttgacgccaccaagaaagttaccgagcggtgcagttgtcgaagcacctt taataaggaccactccacgtaacttgaacaaaagtggattttcttcaccagtacaaactctatcagacattgacgcaggg agccccattatgcaaagacgtttgtccgaattggaggaagaaaggaagcagaatatcaagaagttgtcaaagtctacgtc aaccaaatcaaaatccgttacagaacgtacatgtaattattctttgcaagacatggtggatggttgtgatgctgggaaag agaataatgcaagaggagcaaaagcaaatgaaaatggtgcaatcaaaatagaatttgaaaatggccaagattttgatgat atgcccaaactgccgaaaatgatcgtacctctaaaacccaatttagatgatgacatcgttgatctggatatagcaccagt actagatgacaaaagtgtgattattgtaaggagtgattctcggaaatcaaagaagaggaagatggatcattctcctagtc taagtgacacggcacttttacaagatcagtcgatattgtcatcagcaaagaaaaagaagaagaatcatgttcagaaactt tctgatgaaaagagtatgccaaagttaagtccccagcgatccatcatggactggatcgtaaaaggatcggcaagtagtgc cttgcgtaacttggaaaaggctacggaaaagggtgataacgaaacagaggatcctttattagatgaaggggagtctttta aacaacaatgtagtgtttctaggagaattgacagtgtcccatccagaggtgtatcaaagaacgggaaaatttctgaacgc agcaaaaatggaaacctgcaaaataagtcgtacttgttgcgcaaaaagttaaaacattgtcgtcaatacggagactttat ttgggatagtttgaaaactggaagatttgcgaagagttcaagaaaagttcataaggatagttcttcaacaaatacaaatg aggatgtggacatgtgtgctagcaaggagggcaattcacaattaacaaacaaaatccaaaaacatatggacatggtcagt aagggaacaccttcaaaaagaaaagttcatttgggtcatagttctactatttcaccccataaacgacaaaaaaatagttc taccatttcaccccagaaaggacagaaaagttccactttctcacctcacaaggaacaaaatcagaggaaaccaagctcta cctcggaagaatcatttttggaggaaatgtcagagagagagcaacaggagtacaaagatagaatgttagccgagagactc gcaaaacagtacgaaatggaagtaaaaatggccactcagttttacaaaatgaagggttctgatgaggagtataacttccg acggaagtccaaagcatctacttcttga |
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Protein
| Protein ID | pfu_aug2.0_392.1_07446.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_392.1_07446.t1 MDELNLEECICPICLCILIEPVTMPCTHTLCYLCFTQNVEDTSLSCPMCRTRISNWARRAAKTKTLINKKLWEDIQQCFP DKVKKRMNDCDDEDLEDAVFHPMINIAQPGEIRQEFEAQLKELEKQREIERRREQEASEKLIRKLQEEEQWQQRENKERE EQDLVLAQQLSKEKEKDNLQDDNLQVGKRQGTRCLSSLSTSQSLTDSRPSSTIDSLINKMREAERLKEEDRRENSPQVLS PFKYKCKTPSDIMVDLTECGRSSKSRGSSIVEVGSNNSSVMSLKNDCEVQVMMDMDKIITMPLSISSRESSNDMITPDNS KEIVRGGVSDTLRCRSTDSSDSIDGELRHFKPIRSCPLTPPRKLPSGAVVEAPLIRTTPRNLNKSGFSSPVQTLSDIDAG SPIMQRRLSELEEERKQNIKKLSKSTSTKSKSVTERTCNYSLQDMVDGCDAGKENNARGAKANENGAIKIEFENGQDFDD MPKLPKMIVPLKPNLDDDIVDLDIAPVLDDKSVIIVRSDSRKSKKRKMDHSPSLSDTALLQDQSILSSAKKKKKNHVQKL SDEKSMPKLSPQRSIMDWIVKGSASSALRNLEKATEKGDNETEDPLLDEGESFKQQCSVSRRIDSVPSRGVSKNGKISER SKNGNLQNKSYLLRKKLKHCRQYGDFIWDSLKTGRFAKSSRKVHKDSSSTNTNEDVDMCASKEGNSQLTNKIQKHMDMVS KGTPSKRKVHLGHSSTISPHKRQKNSSTISPQKGQKSSTFSPHKEQNQRKPSSTSEESFLEEMSEREQQEYKDRMLAERL AKQYEMEVKMATQFYKMKGSDEEYNFRRKSKASTS |
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