Gene
| Gene Model ID | pfu_aug2.0_392.1_07447 |
|---|---|
| Locus | scaffold392.1 : 84646 ... 107500 : + |
| To GenomeBrowser | scaffold392.1:84646..107500 |
| Genes list of scaffold | scaffold392.1 |
| Synonym | pfu_aug1.0_20273.1_18702 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| brain mitochondrial carrier protein 1 isoform x2 | GO:0005740 GO:0016020 GO:0044765 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_392.1_07447.t1 | 3 | 1 | Mito_carr | 4 | 96 | 0.0 | 233.7 | 2.7e-24 | 2.0e-20 | 72.2 |
| pfu_aug2.0_392.1_07447.t1 | 3 | 2 | Mito_carr | 102 | 189 | 0.0 | 233.7 | 1.4e-27 | 1.0e-23 | 82.8 |
| pfu_aug2.0_392.1_07447.t1 | 3 | 3 | Mito_carr | 202 | 297 | 0.0 | 233.7 | 5.3e-26 | 4.0e-22 | 77.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_392.1_07447.t1 | gi|676463356|ref|XP_009056571.1| | hypothetical protein LOTGIDRAFT_162365 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_392.1_07447.t1 | gi|593760219|ref|XP_007118842.1| | PREDICTED: brain mitochondrial carrier protein 1 isoform X1 [Physeter catodon] | 0.0 |
| pfu_aug2.0_392.1_07447.t1 | gi|593760221|ref|XP_007118843.1| | PREDICTED: brain mitochondrial carrier protein 1 isoform X2 [Physeter catodon] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_392.1_07447.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_392.1_07447.t1 atgagcgattggcgtccctttctttatggaggatttgcgtcaattgcagcagaatttggaacattccccattgatacaac taaaacccgccttcaagtacaaggacagcagtttgatgtacatctagcacagatcaagtaccgtggcatggtacatgcct tatatcggatcttaaaagaggaaggatacttagctttatactctggcattgcaccagctttactgaggcaggctacatat ggcactataaagatcggtgtataccactctatgaagggcatctttgtctctgatcctagagatgagacgttaccagttaa cattctgtgtgggattgtagcgggagtggtatcaagctgtattgctaatcctacagatgttctcaaggtacgactgcaag ctcagtgtcaacaggcagacagaacctccatgttgagggcattcatacagatctacaaacaggagggtgtaggaggacta tggaggggtgtaggaccaacagctcagagggcagcaacagttgcaggagttatgttacctgcttatgatgtgttcaagaa gtatataattctttctggggtactggaagacaccaaggaaactcatttcctagccagtttttgtgctggagtgatcggtg ccgttttctccacacctattgatgttgcaaagactcgcatgatgaatcaaaggaaattgaaggcagcaacgctacagcac ggacatggagccaacacggtactactctataggtcttcattggactgtctatcgaggacagtaaagacggaagggctttc agcaatctacaaaggttttgttcccacatggttcagacttggtccctggaatatcatatttttcatgacgtatgaacaac tcaagagaatttattga |
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Protein
| Protein ID | pfu_aug2.0_392.1_07447.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_392.1_07447.t1 MSDWRPFLYGGFASIAAEFGTFPIDTTKTRLQVQGQQFDVHLAQIKYRGMVHALYRILKEEGYLALYSGIAPALLRQATY GTIKIGVYHSMKGIFVSDPRDETLPVNILCGIVAGVVSSCIANPTDVLKVRLQAQCQQADRTSMLRAFIQIYKQEGVGGL WRGVGPTAQRAATVAGVMLPAYDVFKKYIILSGVLEDTKETHFLASFCAGVIGAVFSTPIDVAKTRMMNQRKLKAATLQH GHGANTVLLYRSSLDCLSRTVKTEGLSAIYKGFVPTWFRLGPWNIIFFMTYEQLKRIY |
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