Gene
| Gene Model ID | pfu_aug2.0_392.1_07450 |
|---|---|
| Locus | scaffold392.1 : 188048 ... 219103 : - |
| To GenomeBrowser | scaffold392.1:188048..219103 |
| Genes list of scaffold | scaffold392.1 |
| Synonym | pfu_aug1.0_6311.1_67416 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_392.1_07450.t1 | 6 | 1 | Sod_Cu | 35 | 81 | 0.0 | 207.0 | 3.8e-05 | 0.56 | 10.3 |
| pfu_aug2.0_392.1_07450.t1 | 6 | 2 | Sod_Cu | 151 | 215 | 0.0 | 207.0 | 0.16 | 2400.0 | -1.5 |
| pfu_aug2.0_392.1_07450.t1 | 6 | 3 | Sod_Cu | 281 | 408 | 0.0 | 207.0 | 7.0e-21 | 1.0e-16 | 61.3 |
| pfu_aug2.0_392.1_07450.t1 | 6 | 4 | Sod_Cu | 452 | 581 | 0.0 | 207.0 | 1.7e-16 | 2.5e-12 | 47.1 |
| pfu_aug2.0_392.1_07450.t1 | 6 | 5 | Sod_Cu | 598 | 740 | 0.0 | 207.0 | 1.6e-18 | 2.4e-14 | 53.6 |
| pfu_aug2.0_392.1_07450.t1 | 6 | 6 | Sod_Cu | 761 | 902 | 0.0 | 207.0 | 2.5e-14 | 3.7e-10 | 40.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_392.1_07450.t1 | gi|676444021|ref|XP_009050292.1| | hypothetical protein LOTGIDRAFT_238948 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_392.1_07450.t1 | gi|291228637|ref|XP_002734284.1| | PREDICTED: uncharacterized protein LOC100377119, partial [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_392.1_07450.t1 | gi|391333616|ref|XP_003741208.1| | PREDICTED: uncharacterized protein LOC100901910 [Metaseiulus occidentalis] | 0.0 |
| pfu_aug2.0_392.1_07450.t1 | gi|632970740|ref|XP_007901815.1| | PREDICTED: uncharacterized protein LOC103185229 isoform X1 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_392.1_07450.t1 | gi|632970742|ref|XP_007901816.1| | PREDICTED: uncharacterized protein LOC103185229 isoform X2 [Callorhinchus milii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_392.1_07450.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_392.1_07450.t1 atgagaaggtgtaaacaattcggatttacctgtttaatgataatatgcacagctttaggaacacacggagtagtattggt tgggaaatttggtatgaggggcgtgacgggtacagtatctctaagtcagaccacaggtgacaccactgcgacagtcagtg tacaagggctgctgaaccagaattcatggcatttccgggaggtccgcactatctatgacgtagctgataaatgttcagac gctcagctaggcagacggtacggacagtttggcgggaatgtaccatcaagcggtacctcaacatttaccataacaaaatc tgaccttgacgacctcaatgctcttacaggcagatcaatcctcttcgtcgaccagacgactaatacacgggtatgtgcca ccctagaggaggacgcaccttacaagaccacaatggcggtgtttcctactgcaatagctggtcacgtggtcatgcgtcaa cttgcatcatcgccgtcttcccatacatctttatacacaaatctgtatcacgtgcaagataccgcctcagcagcagagag taacgtcacgctacatgtatatgacggatcagtgatcgaatcaaacgatacatcagagcgatgtaacaatataggtacat caatacagactataggtaccgtcactgtaggaaacaccaaagatagctcaataacaggtatggttgtgagtaatctagct ttaagtggtaacactggtgtggtcaaaaaggttttgggcgttgtggctccaaacggaacagtgctgggatgtgcaataat tagacaagtgatgccaaggactgcaacaactatgatcagccgtgatggagtgaagggaatgtttcagttcacacagaatt ctccattcgatcccacacactctcaggtggacattatgggacttgcaggtatagcggggggctaccatgtccacgagtgg ccggtcccgcagagacttaccaaggaccaagctgtatgtagcgatagcagtgttagtggccactttaatccattcatggc ttcaaactttccacctgctgcaacaggtacaaatgaccagtatgaagtaggggatctgagtggaaaatatggcttactta ccggaagaaatagtctaaatgctaattataccgactggaatttaccattattcggagccaatagcattataggtagatct attgtgattcataaaactgcacagtccgcaagatgggtttgtgctaatgttgaggatgttcagtcgtacaaaattgctcg tgctacattccactacccggttataggttacatgattttcaagcagccagttaatgattggcaatatgcagatacacaga tatacgtagagctgaactatggcgacggcacagcaacgtcctctgtgaatcatgattggcatgtgcaccagacgacaatc ggtgacgacatggatgcgtcatcaggtcgatgtatgtccgtaggaggtcattacaatccatataatgtggacctccatgg taattaccagaccgtttgttcaaccaatagtcctctaagatgtgaagtcggggatttgtccaaaaaacatggccgcctcg atattcgtacaagtggcggtggcatgcagcgtgcttttttcacagacgttgatctgcctctgtcggggcctcttagcatt gtgggtaaatcgatcgttatccacgccccaaacagcggttcagctagattttcttgtgctaatatacttcctgtcccgga aaggaaggtcaaggtcgatacgtggtacaaaaattcacagtcgtctgtttccggtagtgttgtattgactgaaaatacag acggcgttctaactgatataacaacaaccgaatttaatctcgcaaacctcgccagtgaagcaaatggcctgcacgtccac caatatccagttgatatggacaagacaacgagttcaccttgtgcggctacttctgttggcggacattttattccatatga gtggaatatagcgaacagtccatcaaatggaaatggatcagacgaccaatatgaggtgggtgacttgagcgggaggtacg gtagtccattactcggtcagacctcatatcgaggtacattccatgattcaaacctccccctccgaggtcctctaagtgta gtgggacggtctattgttatacataaatctgacaatcaggcttctagatgggtgtgtggcgatattgtagaagacacgtc atcgacttccggcaaactgtaccaatcaaaagccacgtttaatcaaggcgatattcaaggctacattcatctgagacagt atttctattcgaatggaggcagcagtgataccgagattctcgtagaccttcgacacanagtacttaaaacgacaggtcat aattggcacgtgcatgttagccaagttaatggtgatgcaacttccggttgtaatacacccggtggacactacaatccgtt ccattctaatactacgagtggttatacggaatgtagcttctccaatcctttacgatgtgagctaggtgaccagtccggga aagtaggacagtatgacgtaggtgggggcaggaaattcttcacggatgtcaacctccctattatgggtcgatatggagtg actggtcgttctttcgtggtgcacggtccaaataatgctgctgcacgcgtggcttgcgcagacattttacccattggaat gccaacagtatcaatgtcttttcctgttaaaaatcccctagataaaaataactttagaacagttttggcacaagctatga gcacagatacgtggaatattatggtgcaagaagtatccagttctagtactgcttcagatccagagtgcatgcaggcctct gtaactctattaggaacaaatgctgatacgttaaaacaatctttagaatctttaatttctactaaagattctaaattagg ggcttatttgccttgtaattcagctattggtatgacgtcatcgatgttgttgctgatttccgtttttatattaaggagga tcctttaa |
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Protein
| Protein ID | pfu_aug2.0_392.1_07450.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_392.1_07450.t1 MRRCKQFGFTCLMIICTALGTHGVVLVGKFGMRGVTGTVSLSQTTGDTTATVSVQGLLNQNSWHFREVRTIYDVADKCSD AQLGRRYGQFGGNVPSSGTSTFTITKSDLDDLNALTGRSILFVDQTTNTRVCATLEEDAPYKTTMAVFPTAIAGHVVMRQ LASSPSSHTSLYTNLYHVQDTASAAESNVTLHVYDGSVIESNDTSERCNNIGTSIQTIGTVTVGNTKDSSITGMVVSNLA LSGNTGVVKKVLGVVAPNGTVLGCAIIRQVMPRTATTMISRDGVKGMFQFTQNSPFDPTHSQVDIMGLAGIAGGYHVHEW PVPQRLTKDQAVCSDSSVSGHFNPFMASNFPPAATGTNDQYEVGDLSGKYGLLTGRNSLNANYTDWNLPLFGANSIIGRS IVIHKTAQSARWVCANVEDVQSYKIARATFHYPVIGYMIFKQPVNDWQYADTQIYVELNYGDGTATSSVNHDWHVHQTTI GDDMDASSGRCMSVGGHYNPYNVDLHGNYQTVCSTNSPLRCEVGDLSKKHGRLDIRTSGGGMQRAFFTDVDLPLSGPLSI VGKSIVIHAPNSGSARFSCANILPVPERKVKVDTWYKNSQSSVSGSVVLTENTDGVLTDITTTEFNLANLASEANGLHVH QYPVDMDKTTSSPCAATSVGGHFIPYEWNIANSPSNGNGSDDQYEVGDLSGRYGSPLLGQTSYRGTFHDSNLPLRGPLSV VGRSIVIHKSDNQASRWVCGDIVEDTSSTSGKLYQSKATFNQGDIQGYIHLRQYFYSNGGSSDTEILVDLRHXVLKTTGH NWHVHVSQVNGDATSGCNTPGGHYNPFHSNTTSGYTECSFSNPLRCELGDQSGKVGQYDVGGGRKFFTDVNLPIMGRYGV TGRSFVVHGPNNAAARVACADILPIGMPTVSMSFPVKNPLDKNNFRTVLAQAMSTDTWNIMVQEVSSSSTASDPECMQAS VTLLGTNADTLKQSLESLISTKDSKLGAYLPCNSAIGMTSSMLLLISVFILRRIL |
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