Gene
| Gene Model ID | pfu_aug2.0_392.1_07452 |
|---|---|
| Locus | scaffold392.1 : 231119 ... 293823 : - |
| To GenomeBrowser | scaffold392.1:231119..293823 |
| Genes list of scaffold | scaffold392.1 |
| Synonym | pfu_aug1.0_7122.1_02381 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_392.1_07452.t1 | 3 | 1 | TUDOR | 6 | 128 | 0.0 | 172.0 | 6.5e-19 | 1.2e-15 | 57.4 |
| pfu_aug2.0_392.1_07452.t1 | 2 | 1 | DEAD | 659 | 679 | 1.2e-17 | 63.9 | 2.2 | 4100.0 | -2.9 |
| pfu_aug2.0_392.1_07452.t1 | 2 | 2 | DEAD | 809 | 980 | 1.2e-17 | 63.9 | 2.2e-20 | 4.0e-17 | 62.2 |
| pfu_aug2.0_392.1_07452.t1 | 3 | 2 | TUDOR | 1238 | 1367 | 0.0 | 172.0 | 3.4e-14 | 6.2e-11 | 42.1 |
| pfu_aug2.0_392.1_07452.t1 | 3 | 3 | TUDOR | 1487 | 1602 | 0.0 | 172.0 | 8.7e-23 | 1.6e-19 | 69.9 |
| pfu_aug2.0_392.1_07452.t1 | 1 | 1 | CS | 1906 | 1980 | 3.9e-07 | 30.5 | 6.0e-10 | 1.1e-06 | 29.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_392.1_07452.t1 | gi|676469262|ref|XP_009058475.1| | hypothetical protein LOTGIDRAFT_233600 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_392.1_07452.t1 | gi|260835029|ref|XP_002612512.1| | hypothetical protein BRAFLDRAFT_120982 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_392.1_07452.t1 | gi|524887317|ref|XP_005100246.1| | PREDICTED: uncharacterized protein LOC101851955 [Aplysia californica] | 0.0 |
| pfu_aug2.0_392.1_07452.t1 | gi|557008028|ref|XP_006005215.1| | PREDICTED: tudor domain-containing protein 12 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_392.1_07452.t1 | gi|632944920|ref|XP_007887764.1| | PREDICTED: putative ATP-dependent RNA helicase TDRD12 [Callorhinchus milii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_392.1_07452.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_392.1_07452.t1 atgccacgaacaaagatacagatatttgagattaagagtccaggccagttttatgggagagagttgattggaggagggtc ggaagaaagcaggaagtttaaacaactagaagacgatctacagactgagtggaacaatgatcagttaccgcaaataccgt acaaccccatcaagggagaaatttgtatagcacgaaagccaaaggacaagaaatggtgtcgtgtgcaaattggcaatacg tatcaaagaagtacaggaccccaggctgactgttatctactggactatggaaccaatgaattcataccaacacaatggtt acgtaaagctaacccctctatgttacgtgtgccgtaccaggtgaaggaatattgtctgtacgggatacaggcactgacga tggtgttacacgaggactgcacggtgaaacctgagccctgcttgatatgggataatgcagccatttccttcatgaagaat ttatgtgaagaggcacggcagaccgaagcagaggtgattcacacagacgacgagggaattgtgcatatcatactttacct tacactgtccaggaaagatatatgtctgaatgacgaactggtgaacaagaattacggaactaagaccacctctcaacaag gtgagattggtcacaagaagagtagtggactgctcgaacttcattcaaaactgaaagcccaggcattaggggcaggtgca gagggaggtgcaactcctatcaagtctaaagtgactgatgtttccgccttgatgaaatcgttaggaattagtaagaaaaa gacgtcacctgaagtcctttctgatccgtcagagtccagattgacactaagtggagcaacgcccataaaaagcaaactaa caccagaatcaaccagtatgatctcagctggtatcaagaaaaagacagtttccccagaaattctaactgaccaatcagat ttaaggaggcttcctagtccatcttatggagacaaatcagcatttagctcttatttgacaaaggtgaaaatgaaccagtc tgcagttttacagtcccattctgacacagataatttgttacaaagtatgcgtagaagtaatccaggctccagcaagttaa acgcatccacagactcattttctcaagacgagaatattatgaatgcaccagtttcaagcagaacctcacctcaagcattt ctaaacagaaatcaaagtgcaacaaacatttcaccagcgagacactctaattcttcctctcctacactcccctcaccgtc cagtacgaaattttcaccgtcaccagtgatgaatattcccagattcagtatgctcaacaatttacttaaaaccattcaac ccaagactgctggtacaccaacttgcttatctgactctgaagttttcaaaaaaagtcctccgggtatatcgtccaatcgg atgacggcacaaacagattgctcctcctcagagggagttgaaaatagtcctctgatgccatcatcagggagggggcgagg caggggacatgctctacttcaggcattaagatctaaggagggaaaatctccaccccaggggaataagtcaaatacagcta atggtcacagtccaggaaaatcttctcccaatgttttacatggggatacagaaatatattgggttgatgaaaaaaattgc attggggaagcgcagcaatatatctttgtacggcagttgatgaagcaatacttccacgtgctgaagaacgaggaggagcg actagcgcctcagcagatagtcattatgtcgtcacagtggtgtagtcctatagaagactttgtcaaggctttcatgttag atccaactattgttattacgtccaagtttgaatcagctgtttatgggaaaatcaatcaggtgccccacatgtgcaagagt aaccagagaatccgagaaatcaccaacattatagacggtataagtgacggaacaaagaccatgatattctgtagtactgt caacaaagtcctagatctcatgagggagcagaaggaggcagagagggaagactccttagtagcggtgttacccaaatctc acttgatatttacagaggagtgttttaaccaagccgcatctatccataatctccttacacggataaagtgtaacgtgccg aaagaacttcaaagtctaatgctgggaatgaaggagggcaacgaggaaaatgatgagaaagaactatgtccttaccttaa ggcctatggaacatgcaggcgagaacacaagtgcgagcagagacacactattttatgtgaagtggacgcacctgtcaacg acaaattaacagcaggggaagtcaaggttagagtagtgaanttacatcctcgtatacagcaggccatgaaggataacgtg tattcagagaacacgtttttcctccaagcttacacatggcagcctatattacgaggagaaaacgtggtggggataggtcc tataaagggaggtaaaaccatggcctacctcacccctatactcagtgcgttaatgcatcctaccacatacgctgacttgc ccgctgtcaatggtccgttagccatagtgttggttccatcatggattaaagcccagactctgtatgacatcgccagtatg tttgtgtcgggactagaaaaactacgtgtcctgacagtgtacggaggtggggctgaggaaacacactacatttccctaat taatggttgtgagttgcttattgccacgcccccttgccttaccagaatgttggacaaacgatacgtactgcttgatcgac tgagccatctgatcatagatgatgcagatatactgctgaaagaatatacagaggaggtacggcaattgatgaagcaatac ttccatgtgctaaaaaacgaggaagagcgactagcgcctcagcagatagtcattatgtcgtcacagtggtgtagtcctat agaagactttgtcaaggcattcatgttagatccaactattgttattacgtccaagtttgaatcagctgtttatgggaaaa tcaatcaggtgccccacatgtgcaagagtaaccagagaatccgagaaatcaccaacattatagacggtataagtgacgga acaaagaccattatattctgtagtactgtcaacaaagtcctagatcttatgaggtactgtcaacaaagtcctagatctca tgaggtatgtgatgatgaatgtattgagcgtctagcaggcctccatttaaacgcccaggaagtcatccattatgacatgt ccgctacaaagacgagattcgggaatcgtctgttctgtatgctggacaattactccaacccgtttcagaaaaaggagcag aaggaggcagagagggaagactcgttagtaacggtgttacccaaatctcacctgatatttacagaggagtgttttaacca agcagcatctatccataatctccttacacggataaagtgtaacgtgccgaaagaacttcaaagtctaatgctgggaatga aggagggcaatgaggaaaatgatgagaaagaactatgtccttaccttaaggcttatggaacatgcaggcgagaacacaag tgtgagcagagacacactattttatgtgaagtggacgcaccggtcaacgacaaattaacagcaggggaagttaaggttag agtagtgaatgtagttggtgccagtcgttactatgttcaggttagagtagtgaatgtagtggatgccagtcgttactacg tccgcgtactggagcaccgatttgatggcaccaaggaggaccactctacagactgtctggtgctgttaaaagaaattaca tcctggtattcagacaaccttaacagagtcaaatatgctatctgtgaaggggatttgtgtgcctatgaagaggataaacg atttcacagggttcggattttggccatcaagaattcaaatatgaaaagaggtggacactttcctgtgaaagcgaaggtac attttgtggatgaaggtagatttgaggatgtatcgatggataagctgtttgagttacccccacatctacacaccattcca tttcaggtgatggaagcctacatatgtcgtattagacctgtagataaagatgaagattggacggtaaatgccaatactgc tgctcatgaaattgtggaagggaaagttttggagggccgtattgtattatgtattgggaacacattatggctcgatccat tagtggaaagacagtatctgacagagaccaaaatctgggttaacagtatgtttgtccgcacacagcttctacgtaaagga tttgctgtcgataatccacagcacattcagaagttgtatgaagtctgccagggaaagattcatatcccagatgcaaataa gaagcttcaaagtccagaggaatctgtagaaactgatgagatgcctgacagtgtagatttccatgaggtgtttgtcagtg aaatggacatgccagatcttatcttcctacagaggaatgaaggtaataaaagaatggacgtaatgctagacgacatgaac gctaaaatggaggaattagatccagcaaagagagataactccaatctgaaagcaggaagtcattgccttgccaaactcga cgatggtcgttggtacagggttaaaattctccagataatcggaaataaagtggaggttttctgtgctgattacggtgata aacagttagtggatgagaacagtctcactcgtatttgccaagagttcacacatctgccttttcaggccattgagtgtcaa ttagcagatgtccagccaagaggagaagaatgggtgaaggaaagcggtgatgcattatgggatatgacacatcacgtcaa tgaagacaagaaaagacttgttgcgaaggttgtttcaaagagtcctgccatgtttgctgggagatttaagtacgcagtgg agctgtatgacacaaccacagctgacgatgtcaatcttgctcaagaattagtatggtctggattagcagctcccaaggaa gggtccaatcttaaggaactgtcgcccatgccaccttttattcttcgcaaagtttacaaacatcctgtacagagaattcc ggatctgatcgcctgcatatactggaaacaggttctcctatttacagtcctattcttgattcttatttttgaagaccaaa aaaggcacataacccctgacggagaaatcttagctatcgtaacaaacaccatccaaagcgatccccagcatctgattgcg tatggaggcgtggcccctatcatcaagctgattggtcgtttgatagatgtggaagtacacaacaatttggttgaagctct tttgatagcagcagagtcttatgacaggaaacaagatcagcagcagagggaaaaattaagtcgtgctgtggccttaaagc tggaacagttgaatagcaatgaaaagtgtctagtgtatgcagccaggttttacatggcttgttgctcagggaataggaaa tacaagaccactctgctggaaataggcgtggcattaatatatcaaagggcactacagggaagtttttctgcattagcaaa gaaaacgtttaagagtttattggacgttttagtcgtgactgtgccaaagtctagtctgtcaaaccatcccaagataaaac ctaccttagacgatcattctatcagctctctacctccagtacattggtcccagaattttgccaaaatcatcctccgaatc gttttgccgagtgtgaaaacagaagacaaccctatcatgctcagtgatacagattttagtttcagggcgaaagttgatgg aaaagtgtttgccttcaactactcgctgtatgggaagattgtgccatctttatgtaaatctctagtcaagagtggggagg tgctggtgtcactccgaaaggcagagaagggaaggtggaagagactgctgagacaagaacataggccgcagaatttgagc atagactttgatagatatatagacacatcatctgacaatgaagagattgcattaagtacagacaatgagccgttcatatt aaagaaaactttcagatcgcttccgaagttttcaaggccagcaactcttgcagaaacacccaagctgaaatcagaatctg agacagagactgactctgatgaagacaacatttacggggctgattttggccctattgatgattacaatgcagacccttat gacttgtttggttgtaaaggatag |
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Protein
| Protein ID | pfu_aug2.0_392.1_07452.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_392.1_07452.t1 MPRTKIQIFEIKSPGQFYGRELIGGGSEESRKFKQLEDDLQTEWNNDQLPQIPYNPIKGEICIARKPKDKKWCRVQIGNT YQRSTGPQADCYLLDYGTNEFIPTQWLRKANPSMLRVPYQVKEYCLYGIQALTMVLHEDCTVKPEPCLIWDNAAISFMKN LCEEARQTEAEVIHTDDEGIVHIILYLTLSRKDICLNDELVNKNYGTKTTSQQGEIGHKKSSGLLELHSKLKAQALGAGA EGGATPIKSKVTDVSALMKSLGISKKKTSPEVLSDPSESRLTLSGATPIKSKLTPESTSMISAGIKKKTVSPEILTDQSD LRRLPSPSYGDKSAFSSYLTKVKMNQSAVLQSHSDTDNLLQSMRRSNPGSSKLNASTDSFSQDENIMNAPVSSRTSPQAF LNRNQSATNISPARHSNSSSPTLPSPSSTKFSPSPVMNIPRFSMLNNLLKTIQPKTAGTPTCLSDSEVFKKSPPGISSNR MTAQTDCSSSEGVENSPLMPSSGRGRGRGHALLQALRSKEGKSPPQGNKSNTANGHSPGKSSPNVLHGDTEIYWVDEKNC IGEAQQYIFVRQLMKQYFHVLKNEEERLAPQQIVIMSSQWCSPIEDFVKAFMLDPTIVITSKFESAVYGKINQVPHMCKS NQRIREITNIIDGISDGTKTMIFCSTVNKVLDLMREQKEAEREDSLVAVLPKSHLIFTEECFNQAASIHNLLTRIKCNVP KELQSLMLGMKEGNEENDEKELCPYLKAYGTCRREHKCEQRHTILCEVDAPVNDKLTAGEVKVRVVXLHPRIQQAMKDNV YSENTFFLQAYTWQPILRGENVVGIGPIKGGKTMAYLTPILSALMHPTTYADLPAVNGPLAIVLVPSWIKAQTLYDIASM FVSGLEKLRVLTVYGGGAEETHYISLINGCELLIATPPCLTRMLDKRYVLLDRLSHLIIDDADILLKEYTEEVRQLMKQY FHVLKNEEERLAPQQIVIMSSQWCSPIEDFVKAFMLDPTIVITSKFESAVYGKINQVPHMCKSNQRIREITNIIDGISDG TKTIIFCSTVNKVLDLMRYCQQSPRSHEVCDDECIERLAGLHLNAQEVIHYDMSATKTRFGNRLFCMLDNYSNPFQKKEQ KEAEREDSLVTVLPKSHLIFTEECFNQAASIHNLLTRIKCNVPKELQSLMLGMKEGNEENDEKELCPYLKAYGTCRREHK CEQRHTILCEVDAPVNDKLTAGEVKVRVVNVVGASRYYVQVRVVNVVDASRYYVRVLEHRFDGTKEDHSTDCLVLLKEIT SWYSDNLNRVKYAICEGDLCAYEEDKRFHRVRILAIKNSNMKRGGHFPVKAKVHFVDEGRFEDVSMDKLFELPPHLHTIP FQVMEAYICRIRPVDKDEDWTVNANTAAHEIVEGKVLEGRIVLCIGNTLWLDPLVERQYLTETKIWVNSMFVRTQLLRKG FAVDNPQHIQKLYEVCQGKIHIPDANKKLQSPEESVETDEMPDSVDFHEVFVSEMDMPDLIFLQRNEGNKRMDVMLDDMN AKMEELDPAKRDNSNLKAGSHCLAKLDDGRWYRVKILQIIGNKVEVFCADYGDKQLVDENSLTRICQEFTHLPFQAIECQ LADVQPRGEEWVKESGDALWDMTHHVNEDKKRLVAKVVSKSPAMFAGRFKYAVELYDTTTADDVNLAQELVWSGLAAPKE GSNLKELSPMPPFILRKVYKHPVQRIPDLIACIYWKQVLLFTVLFLILIFEDQKRHITPDGEILAIVTNTIQSDPQHLIA YGGVAPIIKLIGRLIDVEVHNNLVEALLIAAESYDRKQDQQQREKLSRAVALKLEQLNSNEKCLVYAARFYMACCSGNRK YKTTLLEIGVALIYQRALQGSFSALAKKTFKSLLDVLVVTVPKSSLSNHPKIKPTLDDHSISSLPPVHWSQNFAKIILRI VLPSVKTEDNPIMLSDTDFSFRAKVDGKVFAFNYSLYGKIVPSLCKSLVKSGEVLVSLRKAEKGRWKRLLRQEHRPQNLS IDFDRYIDTSSDNEEIALSTDNEPFILKKTFRSLPKFSRPATLAETPKLKSESETETDSDEDNIYGADFGPIDDYNADPY DLFGCKG |
|