Gene
| Gene Model ID | pfu_aug2.0_392.1_07453 |
|---|---|
| Locus | scaffold392.1 : 293924 ... 303209 : + |
| To GenomeBrowser | scaffold392.1:293924..303209 |
| Genes list of scaffold | scaffold392.1 |
| Synonym | pfu_aug1.0_14935.1_03566 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| m-phase phosphoprotein 6 | GO:0005634 GO:0006364 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_392.1_07453.t1 | 2 | 1 | MPP6 | 10 | 116 | 3.0e-25 | 88.5 | 6.2e-29 | 3.0e-25 | 88.5 |
| pfu_aug2.0_392.1_07453.t1 | 2 | 2 | MPP6 | 129 | 161 | 3.0e-25 | 88.5 | 0.32 | 1600.0 | -0.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_392.1_07453.t1 | gi|676469259|ref|XP_009058474.1| | hypothetical protein LOTGIDRAFT_217677 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_392.1_07453.t1 | gi|524903491|ref|XP_005107945.1| | PREDICTED: M-phase phosphoprotein 6-like isoform X1 [Aplysia californica] | 8.40779e-45 |
| pfu_aug2.0_392.1_07453.t1 | gi|585647794|ref|XP_006814109.1| | PREDICTED: M-phase phosphoprotein 6-like [Saccoglossus kowalevskii] | 3.9937e-43 |
| pfu_aug2.0_392.1_07453.t1 | gi|21312048|ref|NP_081034.1| | M-phase phosphoprotein 6 [Mus musculus] | 8.0e-40 |
| pfu_aug2.0_392.1_07453.t1 | gi|558117446|ref|XP_006087100.1| | PREDICTED: M-phase phosphoprotein 6 [Myotis lucifugus] | 2.0e-38 |
Transcript
| Transcript ID | pfu_aug2.0_392.1_07453.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_392.1_07453.t1 atgacagatggcactccaaagtcaaatttgtccaaaaatgtgcttcaaatgaggtttatgcaaagaagtgcactaagagt tgaaaaagaaaaaagtgaagaagagagacaaagagatattgacgatgagcactgggtgttagatctgcctgaaacaaaac aaaaagagagcaaatatgtttttgatccaagctatacaagtgtagagcggctgtgttatggacgtatgtcatttaatggt tttaatgttgaagttgagaaattaatgaagttacacaatatgtctgcagaattagaagcagctgaagaacgggagagaga aatcagtgttcctgataaagaaatggcaaacaggtataaatcattaattgggacaatcggtaaaaagtttgccaagaaga ggcagagatctgaaataaaagacccagatgatggtaaagtaacgattgacttaacacaagataacgtaccgatgaaaaag aagaagaataaagagaagccaaaattcctcaaaccagctgattga |
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Protein
| Protein ID | pfu_aug2.0_392.1_07453.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_392.1_07453.t1 MTDGTPKSNLSKNVLQMRFMQRSALRVEKEKSEEERQRDIDDEHWVLDLPETKQKESKYVFDPSYTSVERLCYGRMSFNG FNVEVEKLMKLHNMSAELEAAEEREREISVPDKEMANRYKSLIGTIGKKFAKKRQRSEIKDPDDGKVTIDLTQDNVPMKK KKNKEKPKFLKPAD |
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