Gene
| Gene Model ID | pfu_aug2.0_393.1_10724 |
|---|---|
| Locus | scaffold393.1 : 86746 ... 97867 : + |
| To GenomeBrowser | scaffold393.1:86746..97867 |
| Genes list of scaffold | scaffold393.1 |
| Synonym | pfu_aug1.0_5750.1_09210 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| estradiol 17-beta-dehydrogenase 8 isoform x1 | GO:0008152 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_393.1_10724.t1 | 1 | 1 | KR | 13 | 164 | 3.6e-13 | 49.5 | 2.7e-16 | 5.7e-13 | 48.9 |
| pfu_aug2.0_393.1_10724.t1 | 1 | 1 | adh_short | 15 | 177 | 2.8e-33 | 115.1 | 1.7e-36 | 3.6e-33 | 114.8 |
| pfu_aug2.0_393.1_10724.t1 | 1 | 1 | adh_short_C2 | 18 | 249 | 2.1e-29 | 103.0 | 1.1e-32 | 2.4e-29 | 102.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_393.1_10724.t1 | gi|260829049|ref|XP_002609475.1| | hypothetical protein BRAFLDRAFT_281754 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_393.1_10724.t1 | gi|524894126|ref|XP_005103566.1| | PREDICTED: estradiol 17-beta-dehydrogenase 8-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_393.1_10724.t1 | gi|676463152|ref|XP_009056504.1| | hypothetical protein LOTGIDRAFT_190314, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_393.1_10724.t1 | gi|62859915|ref|NP_001016671.1| | estradiol 17-beta-dehydrogenase 8 [Xenopus (Silurana) tropicalis] | 0.0 |
| pfu_aug2.0_393.1_10724.t1 | gi|530596742|ref|XP_005291911.1| | PREDICTED: estradiol 17-beta-dehydrogenase 8 [Chrysemys picta bellii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_393.1_10724.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_393.1_10724.t1 atgaaagtatggcaatgtaatttatctgttctatttctaagtacaggtgcgggtagtggaatagggcgagcagtgtgtaa tgtatttgccaaagaaggagccactgtagcggcagtagacatcaatgaaacaggcataaaagaaacagtgcagtccctta gtggagagggtcatcacagttttcttgctgatatttcaagctctacctcagtaaatgatctaatggcacaggtcaaggac aaattctcaaggtcaccttcagtggcagttaattcagctggaataacaagggataagaccatactgaaactaacagaaga gaattttgacaaagttatagatgtcaacttaaagggtacctttcttcttaatcaagcagtggcaaagatgatgattgacc agaaagttaaaggcggctccattgtaaacatatcaagtatcgtaggtaaggttggaaatataggacaaacaaattatgga gcttccaaagcaggtgtgattggttttactaaatcagcagctaaggaactagctaaatttgatatacgagtgaacgccat tctgcccggttttatagaaacgccaatgacagatgtggtaccagaacaccttataagtataacaaaaatgttgatacctg cagctaggctaggaaaaccagaagaggttgcagaggcttgtctatttttagcatcagatagcagtagttatataacaggg gttgctttagaggtaacaggtggacttttcatgtga |
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Protein
| Protein ID | pfu_aug2.0_393.1_10724.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_393.1_10724.t1 MKVWQCNLSVLFLSTGAGSGIGRAVCNVFAKEGATVAAVDINETGIKETVQSLSGEGHHSFLADISSSTSVNDLMAQVKD KFSRSPSVAVNSAGITRDKTILKLTEENFDKVIDVNLKGTFLLNQAVAKMMIDQKVKGGSIVNISSIVGKVGNIGQTNYG ASKAGVIGFTKSAAKELAKFDIRVNAILPGFIETPMTDVVPEHLISITKMLIPAARLGKPEEVAEACLFLASDSSSYITG VALEVTGGLFM |
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