Gene
| Gene Model ID | pfu_aug2.0_393.1_10731 |
|---|---|
| Locus | scaffold393.1 : 261291 ... 273224 : - |
| To GenomeBrowser | scaffold393.1:261291..273224 |
| Genes list of scaffold | scaffold393.1 |
| Synonym | pfu_aug1.0_2069.1_29972 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| uncharacterized protein loc101846910 | GO:0005576 GO:0044464 GO:0044707 GO:0044763 GO:0048522 GO:0050896 GO:0065008 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_393.1_10731.t1 | 1 | 1 | Fibrinogen_C | 65 | 263 | 1.1e-27 | 97.2 | 2.1e-31 | 1.6e-27 | 96.6 |
| pfu_aug2.0_393.1_10731.t1 | 2 | 1 | ELH | 308 | 371 | 1.2e-07 | 31.1 | 9.8e-07 | 0.0072 | 15.5 |
| pfu_aug2.0_393.1_10731.t1 | 2 | 2 | ELH | 387 | 429 | 1.2e-07 | 31.1 | 1.2e-06 | 0.0089 | 15.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_393.1_10731.t1 | gi|260803846|ref|XP_002596800.1| | hypothetical protein BRAFLDRAFT_149983 [Branchiostoma floridae] | 5.0e-22 |
| pfu_aug2.0_393.1_10731.t1 | gi|524899953|ref|XP_005106402.1| | PREDICTED: uncharacterized protein LOC101846910 [Aplysia californica] | 1.0e-19 |
| pfu_aug2.0_393.1_10731.t1 | gi|676431989|ref|XP_009046428.1| | hypothetical protein LOTGIDRAFT_111080, partial [Lottia gigantea] | 2.0e-18 |
| pfu_aug2.0_393.1_10731.t1 | gi|734600606|ref|XP_010755403.1| | PREDICTED: fibroleukin-like [Larimichthys crocea] | 6.0e-18 |
| pfu_aug2.0_393.1_10731.t1 | gi|524876802|ref|XP_005095110.1| | PREDICTED: tenascin-R-like isoform X1 [Aplysia californica] | 7.0e-18 |
Transcript
| Transcript ID | pfu_aug2.0_393.1_10731.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_393.1_10731.t1 atgacacgtgtatttgtagtggaggatacgtgggacaaaactgtcaacgattggctacagacctgtcaaaatggaggaac acccatgaatgacacgtgtatttgtagtggaggatacgtgggacaaaactgtcaacgattggctacagagtgtggtgaac tgctccaatatccttggtatccaaaagctgagttgatagttcagatacagccgtcccttaatcttgacccgataacaatc gtatgtgaccttgacttattgaatccagttacaaacaaaaccagaaactacgtacaaaaacaccatcagctaggggtcac cttcaacaggttatgggacgattacaaaaacgggtttggagacctttcacaaaacgagtattggatcggaaacgaggcta ttcaccagctaacttcgtcatttccttcttcaacactagtcatcgaaatggctagtgagaattggttgggtatatggcag cagacgtatgagggattcagggtcggtgatgaggcttcagagtacttgatgacttacacatctacatctccatacccggg gaattctggaatgggagattcgctgatacaagtaaataacacaatgttttgcactgcggatcacaacaataatatcgacc ctaatgtaaattgcgggacagttcgtcagtcaggattctggctgtgtgacccaggcaacaagtgtggacacggaaatcca aatggtcagctaatgaaaactggaaatggtgaaattctctatgtttaccacgaagtattttggaatactttaaatgtagg aacgacctcgccatggtcaaacatgagggagagagcgatatatattttggcaataatggtagttttatcaaacataggag gaacagtatccgagaatgacgatagtggttcaagtgaagaaaaacccgcatttattgaaatcgaggactcaccggaagtc agcaaaaggacgtatatatcacttaacggtgacatgcgcagtctcgccaaaatgttgatgcgccactacggaaatcgatc tgtgaagcgcccagttgaaaattatacatctttacggaagaaattgtatgcacttggaaaacgtgatgcaaaaccaacat tacgtgatctactaaaggactggattttcaagcagacaaagcgccaaagactgtctgtaaacagcgccctagcaagttta gccgacatggtgtcagctgacggtcatcgaagaatgaaagaggaaatgtcttctaatcatcagcgactccttggacttgg taaaagataa |
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Protein
| Protein ID | pfu_aug2.0_393.1_10731.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_393.1_10731.t1 MTRVFVVEDTWDKTVNDWLQTCQNGGTPMNDTCICSGGYVGQNCQRLATECGELLQYPWYPKAELIVQIQPSLNLDPITI VCDLDLLNPVTNKTRNYVQKHHQLGVTFNRLWDDYKNGFGDLSQNEYWIGNEAIHQLTSSFPSSTLVIEMASENWLGIWQ QTYEGFRVGDEASEYLMTYTSTSPYPGNSGMGDSLIQVNNTMFCTADHNNNIDPNVNCGTVRQSGFWLCDPGNKCGHGNP NGQLMKTGNGEILYVYHEVFWNTLNVGTTSPWSNMRERAIYILAIMVVLSNIGGTVSENDDSGSSEEKPAFIEIEDSPEV SKRTYISLNGDMRSLAKMLMRHYGNRSVKRPVENYTSLRKKLYALGKRDAKPTLRDLLKDWIFKQTKRQRLSVNSALASL ADMVSADGHRRMKEEMSSNHQRLLGLGKR |
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