Gene
| Gene Model ID | pfu_aug2.0_397.1_23969 |
|---|---|
| Locus | scaffold397.1 : 59247 ... 63365 : - |
| To GenomeBrowser | scaffold397.1:59247..63365 |
| Genes list of scaffold | scaffold397.1 |
| Synonym | pfu_aug1.0_830.1_15247 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| pleckstrin domain-containing protein | GO:0050794 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_397.1_23969.t1 | 1 | 1 | RhoGEF | 2 | 122 | 3.2e-18 | 66.2 | 2.8e-22 | 4.1e-18 | 65.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_397.1_23969.t1 | gi|676433736|ref|XP_009046997.1| | hypothetical protein LOTGIDRAFT_172169 [Lottia gigantea] | 2.0e-25 |
| pfu_aug2.0_397.1_23969.t1 | gi|524894572|ref|XP_005103783.1| | PREDICTED: uncharacterized protein LOC101857266 [Aplysia californica] | 3.0e-21 |
| pfu_aug2.0_397.1_23969.t1 | gi|585643012|ref|XP_006811276.1| | PREDICTED: intersectin-2-like [Saccoglossus kowalevskii] | 2.0e-18 |
| pfu_aug2.0_397.1_23969.t1 | gi|470303067|ref|XP_004347833.1| | hypothetical protein CAOG_04008 [Capsaspora owczarzaki ATCC 30864] | 2.0e-15 |
| pfu_aug2.0_397.1_23969.t1 | gi|449662606|ref|XP_004205581.1| | 5.0e-15 |
Transcript
| Transcript ID | pfu_aug2.0_397.1_23969.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_397.1_23969.t1 atggaggagaggctgatcaagtggaagtacagtggaatgctgggagatatcttcatcaaaatgacagactctgtagaggg agatggtctggctttgtacaaagattacatcaacgatttttcttccatcatcaacaacatgaataaatggttttcacagt cagctgccttcagggaatttatgggaagcacaaatcttgcatcctccagcgtaattccattattactggctcccctacaa cagataccaaagtattcactactcatcaaggatctggtcaagtacacaggtaccgaccacccagatcgttattaccttga gtctgtgttgtcacggctgaagaacttccttaacgtgatgaacgaggagctagaacaagccatgcagtaccttaatgttg ctagaccatcatacaacagatcaagggaatgtggaaattcaactcactctgacagtagtggggatgctaacaatatatct agtgctagagatagtggtgtccattctagtggtgatgaccctccacacagaatccaagcttcccctaacacagccagacg ccagacgctatgtattgcaagttttgagagagaagagagaaaggcgaggtatgggttcccatcaccagaactatacagcc agacccctgtcagtccctccccgttcacatatactagactatggcagccatcctga |
|
Protein
| Protein ID | pfu_aug2.0_397.1_23969.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_397.1_23969.t1 MEERLIKWKYSGMLGDIFIKMTDSVEGDGLALYKDYINDFSSIINNMNKWFSQSAAFREFMGSTNLASSSVIPLLLAPLQ QIPKYSLLIKDLVKYTGTDHPDRYYLESVLSRLKNFLNVMNEELEQAMQYLNVARPSYNRSRECGNSTHSDSSGDANNIS SARDSGVHSSGDDPPHRIQASPNTARRQTLCIASFEREERKARYGFPSPELYSQTPVSPSPFTYTRLWQPS |
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