Gene
| Gene Model ID | pfu_aug2.0_397.1_23977 |
|---|---|
| Locus | scaffold397.1 : 184100 ... 199214 : + |
| To GenomeBrowser | scaffold397.1:184100..199214 |
| Genes list of scaffold | scaffold397.1 |
| Synonym | pfu_aug1.0_7578.1_60274 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_397.1_23977.t1 | 2 | 1 | DUF2428 | 1 | 127 | 5.4e-36 | 123.9 | 4.2e-38 | 3.1e-34 | 118.1 |
| pfu_aug2.0_397.1_23977.t1 | 4 | 1 | HEAT | 120 | 140 | 1.0e-05 | 25.1 | 0.0014 | 11.0 | 6.4 |
| pfu_aug2.0_397.1_23977.t1 | 4 | 2 | HEAT | 228 | 255 | 1.0e-05 | 25.1 | 0.0062 | 46.0 | 4.4 |
| pfu_aug2.0_397.1_23977.t1 | 4 | 3 | HEAT | 425 | 447 | 1.0e-05 | 25.1 | 0.00039 | 2.9 | 8.1 |
| pfu_aug2.0_397.1_23977.t1 | 2 | 2 | DUF2428 | 576 | 604 | 5.4e-36 | 123.9 | 0.0054 | 40.0 | 3.1 |
| pfu_aug2.0_397.1_23977.t1 | 4 | 4 | HEAT | 638 | 661 | 1.0e-05 | 25.1 | 0.21 | 1500.0 | -0.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_397.1_23977.t1 | gi|705688390|ref|XP_010121325.1| | PREDICTED: thyroid adenoma-associated protein homolog, partial [Chlamydotis macqueenii] | 0.0 |
| pfu_aug2.0_397.1_23977.t1 | gi|700382571|ref|XP_009931189.1| | PREDICTED: thyroid adenoma-associated protein [Opisthocomus hoazin] | 0.0 |
| pfu_aug2.0_397.1_23977.t1 | gi|699644491|ref|XP_009878958.1| | PREDICTED: thyroid adenoma-associated protein [Charadrius vociferus] | 0.0 |
| pfu_aug2.0_397.1_23977.t1 | gi|690446089|ref|XP_009323596.1| | PREDICTED: thyroid adenoma-associated protein [Pygoscelis adeliae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_397.1_23977.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_397.1_23977.t1 atgttatggaaaagtaatatcaaagagctaaatcaactgccaggacagtggttagagtcagtaatgatggaagtgaaggg tgatgataccaacaatagactgtgtgccactcgtcgtagtgcaggattaccattctttatacagaccttagtaagtactg agccaggcagcacagggagaccatgttttaagtctactatcgatgtactactagagctggcccaaactcctgataaggaa accatatcaaatgcaaaggtacatgcgttgaatattttgagagcattgtatcgggacacaaggttaggggaggtggtaac accttacatatcatctggtctacaggctgctgtcctcggtttccagtcaccattttgggcagttagaaattcagcaacat tacttctcagtgcaatgataaccaggatatttggagtgaaaaggagcaaggacgaatctaacctttcaaagaaaaactgt ctttcaggtcgtcagtttttctaccagtacccagatctttttcctttcttactaaaacagttggaggcagcaaccaaaga tataggtgacagtagaaccttacatctacatcctggtctttatccagtgttgatgatcctgagccgacttttccagtcgc cattagagaacaccgatacgagtctgaatctctcagcttttatccctcatataacaagatgtagctatagtcctgtattt aagacacgtcagatggcatcgagggcgttaagacctctagtacagagagataagatgaagactgttctccaacagttact gtccttgatcccggatgacatggataaagaagttatacctgtatgtaccagtcgtgcacatggtgcgttgttacaggtta atggacttctggaaatgataagggatcagactggagaggaatggtatgatacatgtatagtcgtggccgagtcatggatt aaaaaattatggtatctcgagagttgtaacaggtgctactatacaaggatggaggcctatacattttcactcagactcat agagatactaagctgtaaacctcccctacagaattgtgtcgtgtacaactctctcttttctaaattcaaggacacaccca tatctgcctatagcaatggtgaattctctaatgcaaagctgcagaacctccctggttacattgagtttgctactacgata tcagacattttccttattcatatagtatttggctgtgacatacaagtatataagactgaggagaaaataggaatagtttg taatttgttggattctgaagtctatgatgtaagactagctgtccttgataatctaactcagagaattctaattgaggatg ttccacaggaagatatgccgaaggtcttgacttctaaagagattttggagaaactacttcacatggctcttggtaaagag gaccattttgaatgccaaattaaggttttggaattattgaataaacaccctagccttcaaggatgctcatggtcccaagt atacccatctttcccagcaacacagatttttgaaaagttccttgatatgatattacataccataagtcattcaccagaac aggtgctacattttgatatcaggatatttgacctagcggccttgactttgaactttgaacttattagggatgaaatcaaa tgtcaggctattgaattcatgagactattgatgtcagatgtgattaaaggaacaaagtcacaagagctgagtgatttact tgagagatggatggacatcttattgtatagtataggatcagagcagagtgtagagttacaatgtagtgtggcggaagtca tccagtacaatgctgacttactattgaaatcatacgactacctaggtcctttgacctttacattctgggacatattggta caactacagcaaagtgatgatcagaaggtcaaggacattgtaaccaaggtcattttagaacttcaaccagacataacagc ccctcttcatcccaccctggctttggacaggaccgtgaaggtcatgatagaactgcatggtaaaagcagaggaaaacatt gcctagagacattactcaactggattatgagagctgatattactgataaggaaggagaagaaaggctgtttgacaagagt gaaatgaatacattcaaagaggacttggtgtttactgagatagtagtaaaacatatactcaattctatgacaatgttgaa acagcacagtgaaagcttcatcccactggacatggtcagggaaaatgaaatggcacttacagagatgagagaaagccaaa cacagatcaatattgaggagaatgagctaaatgaactgcgtgaaaaattcaatgaaaaactctcgcaacagtgttataac tgggagaatatctcagaattgactccatttgttaagagtgggttgtatcaggaacaagctgggcttgtttacaagtactt cgtgactgacttgctcatcaattctttcttcaaagatgcaaatagagttaaacatgcaaacacaaaattacaactcttca aggatatggttccaaacacttttttctggcccattcttgctggcttaagatag |
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Protein
| Protein ID | pfu_aug2.0_397.1_23977.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_397.1_23977.t1 MLWKSNIKELNQLPGQWLESVMMEVKGDDTNNRLCATRRSAGLPFFIQTLVSTEPGSTGRPCFKSTIDVLLELAQTPDKE TISNAKVHALNILRALYRDTRLGEVVTPYISSGLQAAVLGFQSPFWAVRNSATLLLSAMITRIFGVKRSKDESNLSKKNC LSGRQFFYQYPDLFPFLLKQLEAATKDIGDSRTLHLHPGLYPVLMILSRLFQSPLENTDTSLNLSAFIPHITRCSYSPVF KTRQMASRALRPLVQRDKMKTVLQQLLSLIPDDMDKEVIPVCTSRAHGALLQVNGLLEMIRDQTGEEWYDTCIVVAESWI KKLWYLESCNRCYYTRMEAYTFSLRLIEILSCKPPLQNCVVYNSLFSKFKDTPISAYSNGEFSNAKLQNLPGYIEFATTI SDIFLIHIVFGCDIQVYKTEEKIGIVCNLLDSEVYDVRLAVLDNLTQRILIEDVPQEDMPKVLTSKEILEKLLHMALGKE DHFECQIKVLELLNKHPSLQGCSWSQVYPSFPATQIFEKFLDMILHTISHSPEQVLHFDIRIFDLAALTLNFELIRDEIK CQAIEFMRLLMSDVIKGTKSQELSDLLERWMDILLYSIGSEQSVELQCSVAEVIQYNADLLLKSYDYLGPLTFTFWDILV QLQQSDDQKVKDIVTKVILELQPDITAPLHPTLALDRTVKVMIELHGKSRGKHCLETLLNWIMRADITDKEGEERLFDKS EMNTFKEDLVFTEIVVKHILNSMTMLKQHSESFIPLDMVRENEMALTEMRESQTQINIEENELNELREKFNEKLSQQCYN WENISELTPFVKSGLYQEQAGLVYKYFVTDLLINSFFKDANRVKHANTKLQLFKDMVPNTFFWPILAGLR |
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