Gene
| Gene Model ID | pfu_aug2.0_397.1_23978 |
|---|---|
| Locus | scaffold397.1 : 200751 ... 204039 : - |
| To GenomeBrowser | scaffold397.1:200751..204039 |
| Genes list of scaffold | scaffold397.1 |
| Synonym | pfu_aug1.0_22880.1_62183 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| glutaredoxin-related protein mitochondrial | GO:0005634 GO:0009055 GO:0015035 GO:0045454 GO:0055114 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_397.1_23978.t1 | 2 | 1 | Glutaredoxin | 43 | 107 | 1.9e-18 | 66.2 | 4.0e-22 | 5.9e-18 | 64.6 |
| pfu_aug2.0_397.1_23978.t1 | 2 | 2 | Glutaredoxin | 117 | 132 | 1.9e-18 | 66.2 | 0.14 | 2000.0 | -1.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_397.1_23978.t1 | gi|676441899|ref|XP_009049637.1| | hypothetical protein LOTGIDRAFT_201172 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_397.1_23978.t1 | gi|260830192|ref|XP_002610045.1| | hypothetical protein BRAFLDRAFT_129234 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_397.1_23978.t1 | gi|395504571|ref|XP_003756621.1| | PREDICTED: glutaredoxin-related protein 5, mitochondrial [Sarcophilus harrisii] | 0.0 |
| pfu_aug2.0_397.1_23978.t1 | gi|524910343|ref|XP_005110052.1| | PREDICTED: glutaredoxin-related protein 5, mitochondrial-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_397.1_23978.t1 | gi|512915142|ref|XP_004928317.1| | PREDICTED: glutaredoxin-related protein 5, mitochondrial [Bombyx mori] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_397.1_23978.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_397.1_23978.t1 atgtccgtccttcgacgtgcgtttcttttgaaggataaaacaacattttgtcgactatttgtcgccagatctgtcagtga cacgggctcaaacgaacatatagacagtctggttaaaggcaaaaaggttgtcgtgtttatgaagggtacccccgacgctc caaggtgtggtttcagtaacgctgtcgtccagatcctcaattttcatggagtgaacaattatgaatcccatgatgttctt caagatgaagctctgagacaaggcataaaggattacagtaactggccaaccatccctcaaacttatctggatggagagtt cttaggaggatgtgatattatgttagagatgcataaaaacggagaacttatagaagaacttaaaaaagtgggcattcgat ctgcattactagataaagaaaatgagacataa |
|
Protein
| Protein ID | pfu_aug2.0_397.1_23978.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_397.1_23978.t1 MSVLRRAFLLKDKTTFCRLFVARSVSDTGSNEHIDSLVKGKKVVVFMKGTPDAPRCGFSNAVVQILNFHGVNNYESHDVL QDEALRQGIKDYSNWPTIPQTYLDGEFLGGCDIMLEMHKNGELIEELKKVGIRSALLDKENET |
|