Gene
| Gene Model ID | pfu_aug2.0_397.1_23979 |
|---|---|
| Locus | scaffold397.1 : 211920 ... 228798 : + |
| To GenomeBrowser | scaffold397.1:211920..228798 |
| Genes list of scaffold | scaffold397.1 |
| Synonym | pfu_aug1.0_411428.1_07178 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_397.1_23979.t3 | 8 | 1 | LRR_6 | 97 | 110 | 3.4e-16 | 57.4 | 0.32 | 960.0 | 0.4 |
| pfu_aug2.0_397.1_23979.t3 | 5 | 1 | LRR_4 | 97 | 104 | 1.1e-08 | 34.5 | 0.51 | 1500.0 | -1.1 |
| pfu_aug2.0_397.1_23979.t3 | 8 | 1 | LRR_1 | 97 | 105 | 1.6e-07 | 30.4 | 0.32 | 950.0 | 0.6 |
| pfu_aug2.0_397.1_23979.t3 | 8 | 2 | LRR_6 | 120 | 141 | 3.4e-16 | 57.4 | 1.2e-07 | 0.00035 | 20.3 |
| pfu_aug2.0_397.1_23979.t3 | 5 | 2 | LRR_4 | 122 | 160 | 1.1e-08 | 34.5 | 1.0e-06 | 0.0031 | 17.1 |
| pfu_aug2.0_397.1_23979.t3 | 8 | 2 | LRR_1 | 122 | 134 | 1.6e-07 | 30.4 | 0.0017 | 5.0 | 7.5 |
| pfu_aug2.0_397.1_23979.t3 | 8 | 3 | LRR_6 | 149 | 170 | 3.4e-16 | 57.4 | 1.0e-06 | 0.003 | 17.4 |
| pfu_aug2.0_397.1_23979.t3 | 8 | 3 | LRR_1 | 149 | 161 | 1.6e-07 | 30.4 | 0.012 | 37.0 | 4.9 |
| pfu_aug2.0_397.1_23979.t3 | 8 | 4 | LRR_6 | 178 | 198 | 3.4e-16 | 57.4 | 0.0042 | 12.0 | 6.2 |
| pfu_aug2.0_397.1_23979.t3 | 5 | 3 | LRR_4 | 178 | 216 | 1.1e-08 | 34.5 | 0.00019 | 0.56 | 9.8 |
| pfu_aug2.0_397.1_23979.t3 | 8 | 4 | LRR_1 | 178 | 189 | 1.6e-07 | 30.4 | 0.023 | 68.0 | 4.0 |
| pfu_aug2.0_397.1_23979.t3 | 8 | 5 | LRR_6 | 203 | 224 | 3.4e-16 | 57.4 | 0.016 | 48.0 | 4.4 |
| pfu_aug2.0_397.1_23979.t3 | 8 | 5 | LRR_1 | 206 | 216 | 1.6e-07 | 30.4 | 1.7 | 4900.0 | -1.6 |
| pfu_aug2.0_397.1_23979.t3 | 5 | 4 | LRR_4 | 209 | 244 | 1.1e-08 | 34.5 | 0.00017 | 0.52 | 10.0 |
| pfu_aug2.0_397.1_23979.t3 | 8 | 6 | LRR_6 | 234 | 250 | 3.4e-16 | 57.4 | 0.0021 | 6.3 | 7.1 |
| pfu_aug2.0_397.1_23979.t3 | 5 | 5 | LRR_4 | 234 | 272 | 1.1e-08 | 34.5 | 0.00072 | 2.1 | 8.0 |
| pfu_aug2.0_397.1_23979.t3 | 8 | 6 | LRR_1 | 234 | 245 | 1.6e-07 | 30.4 | 0.0012 | 3.6 | 7.9 |
| pfu_aug2.0_397.1_23979.t3 | 8 | 7 | LRR_6 | 260 | 272 | 3.4e-16 | 57.4 | 0.41 | 1200.0 | 0.1 |
| pfu_aug2.0_397.1_23979.t3 | 8 | 7 | LRR_1 | 262 | 272 | 1.6e-07 | 30.4 | 1.2 | 3600.0 | -1.2 |
| pfu_aug2.0_397.1_23979.t3 | 8 | 8 | LRR_6 | 397 | 404 | 3.4e-16 | 57.4 | 4.8 | 14000.0 | -3.2 |
| pfu_aug2.0_397.1_23979.t3 | 8 | 8 | LRR_1 | 397 | 405 | 1.6e-07 | 30.4 | 5.0 | 15000.0 | -3.3 |
Transcript
| Transcript ID | pfu_aug2.0_397.1_23979.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_397.1_23979.t1 atgtcctttgctccgattgtacatatatctaggataaaacatactcgaaggaaacaaaagaataaaaagaaagcaaaaaa agaaatagatcacaaggaagaggaacggaagaagttgttgattacgaaagaaaatgtggacataggacatcattcgtatg tagaagcctgtcaattactggaaacagctcctatcagaaaggtcaaggagcaactaaaagagacagagatatgtctacaa catgtggggctcaatacgaaagacgtcatcgccctcacatacgcacttttgaataacaatcgagtagagagtttggattt ggaggataaccggttgacacacgaagccattttacacgtggtggaagtgctacgtcataatattacgctttctagtctga gtctttccgataacaagtttagtccaaactgtgctctggtgctagcggatgccataacaaattctacttggttaacgcat ctcagcctgtcaggttgcagtttaggagatgatggtgctagacatattggttacctactgaagaacaatgttagtttggt atggctcaacctgagtaacaatgcaataggagaaaccggggcaaagtttataggcaaagctttaactataaatgacacag tagaggtattggacttgagctggaatcatgtccgtcgtatgggagcagtcacaatctgcaaggggctccagaccaactcg tcattagccaatttaaacctcgcgtggaacgggtttgcgtatgaaggaggcattgctttggaggaagtactgaaacaaaa ccttgccctgaaggttcttgacatcagtaataatagaatcaactgggaaggtgtcgtacacatatcccgaggtctccgtg gcaacagcgtcttacaaatattaaaaataggctgtaacccaatagcgatggaaggagtgcaaaaattgcttcaagccata cataccacaagaagtagtgtgatccatatcagttttgaggacattccgatcaactctaaaatacaagaaattgctacggc gatatctaacataaggccattttccattgcacatggagcagtcacagattcacattttatgattgggatcaagagagcat actggcaaacggcgtga |
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| Transcript ID | pfu_aug2.0_397.1_23979.t2 |
| Definition | - |
>pfu_aug2.0_397.1_23979.t2 atgtcctttgctccgattgtacatatatctaggataaaacatactcgaaggaaacaaaagaataaaaagaaagcaaaaaa agaaatagatcacaaggaagaggaacggaagaagttgttgattacgaaagaaaatgtggacataggacatcattcgtatg tagaagcctgtcaattactggaaacagctcctatcagaaaggtcaaggagcaactaaaagagacagagatatgtctacaa catgtggggctcaatacgaaagacgtcatcgccctcacatacgcacttttgaataacaatcgagtagagagtttggattt ggaggataaccggttgacacacgaagccattttacacgtggtggaagtgctacgtcataatattacgctttctagtctga gtctttccgataacaagtttagtccaaactgtgctctggtgctagcggatgccataacaaattctacttggttaacgcat ctcagcctgtcaggttgcagtttaggagatgatggtgctagacatattggttacctactgaagaacaatgttagtttggt atggctcaacctgagtaacaatgcaataggagaaaccggggcaaagtttataggcaaagctttaactataaatgacacag tagaggtattggacttgagctggaatcatgtccgtcgtatgggagcagtcacaatctgcaaggggctccagaccaactcg tcattagccaatttaaacctcgcgtggaacgggtttgcgtatgaaggaggcattgctttggaggaagtactgaaacaaaa ccttgccctgaaggttcttgacatcagtaataatagaatcaactgggaaggtgtcgtacacatatcccgaggtctccgtg gcaacagcgtcttacaaatattaaaaataggctgtaacccaatagcgatggaaggagtgcaaaaattgcttcaagccata cataccacaagaagtagtgtgatccatatcagttttgaggacattccgatcaactctaaaatacaagaaattgctacggc gatatctaacataaggccattttccattgcacatggagcagtcacagattcacattttatgattgggatcaagagagcac caattagcgaacaggatatgagaatggtcgccagacgtttagacaagaggggagaaggaactattagttacagcatactg gcaaacggcgtgagaaatcacatgagagaggaaagaaaagaagacagacgtcaagaaatcttagaaatgaaaagacgaga gcatagaaaagccctactcaatatgggatataatgaaatcaaacctgtatattttactgaagtaaacatgtttacttcat ctgcaagcagaaacttttcaagactactgctgagctcagcatcgtccttctcgagtaagcatgagtctgtcaatggcaag gagccacttcgactaccaccccttgcacaagagtcaaatcgtgcaaagtcggcttctcaacctaacatatactaa |
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| Transcript ID | pfu_aug2.0_397.1_23979.t3 |
| Definition | - |
>pfu_aug2.0_397.1_23979.t3 atgtcctttgctccgattgtacatatatctaggataaaacatactcgaaggaaacaaaagaataaaaagaaagcaaaaaa agaaatagatcacaaggaagaggaacggaagaagttgttgattacgaaagaaaatgtggacataggacatcattcgtatg tagaagcctgtcaattactggaaacagctcctatcagaaaggtcaaggagcaactaaaagagacagagatatgtctacaa catgtggggctcaatacgaaagacgtcatcgccctcacatacgcacttttgagtctttccgataacaagtttagtccaaa ctgtgctctggtgctagcggatgccataacaaattctacttggttaacgcatctcagcctgtcaggttgcagtttaggag atgatggtgctagacatattggttacctactgaagaacaatgttagtttggtatggctcaacctgagtaacaatgcaata ggagaaaccggggcaaagtttataggcaaagctttaactataaatgacacagtagaggtattggacttgagctggaatca tgtccgtcgtatgggagcagtcacaatctgcaaggggctccagaccaactcgtcattagccaatttaaacctcgcgtgga acgggtttgcgtatgaaggaggcattgctttggaggaagtactgaaacaaaaccttgccctgaaggttcttgacatcagt aataatagaatcaactgggaaggtgtcgtacacatatcccgaggtctccgtggcaacagcgtcttacaaatattaaaaat aggctgtaacccaatagcgatggaaggagtgcaaaaattgcttcaagccatacataccacaagaagtagtgtgatccata tcagttttgaggacattccgatcaactctaaaatacaagaaattgctacggcgatatctaacataaggccattttccatt gcacatggagcagtcacagattcacattttatgattgggatcaagagagcaccaattagcgaacaggatatgagaatggt cgccagacgtttagacaagaggggagaaggaactattagttacagcatactggcaaacggcgtgagaaatcacatgagag aggaaagaaaagaagacagacgtcaagaaatcttagaaatgaaaagacgagagcatagaaaagccctactcaatatggga tataatgaaatcaaacctgtatattttactgaagtaaacatgtttacttcatctgcaagcagaaacttttcaagactact gctgagctcagcatcgtccttctcgagtaagcatgagtctgtcaatggcaaggagccacttcgactaccaccccttgcac aagagtcaaatcgtgcaaagtcggcttctcaacctaacatatactaa |
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Protein
| Protein ID | pfu_aug2.0_397.1_23979.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_397.1_23979.t1 MSFAPIVHISRIKHTRRKQKNKKKAKKEIDHKEEERKKLLITKENVDIGHHSYVEACQLLETAPIRKVKEQLKETEICLQ HVGLNTKDVIALTYALLNNNRVESLDLEDNRLTHEAILHVVEVLRHNITLSSLSLSDNKFSPNCALVLADAITNSTWLTH LSLSGCSLGDDGARHIGYLLKNNVSLVWLNLSNNAIGETGAKFIGKALTINDTVEVLDLSWNHVRRMGAVTICKGLQTNS SLANLNLAWNGFAYEGGIALEEVLKQNLALKVLDISNNRINWEGVVHISRGLRGNSVLQILKIGCNPIAMEGVQKLLQAI HTTRSSVIHISFEDIPINSKIQEIATAISNIRPFSIAHGAVTDSHFMIGIKRAYWQTA |
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| Protein ID | pfu_aug2.0_397.1_23979.t2 |
| Definition | - |
>pfu_aug2.0_397.1_23979.t2 MSFAPIVHISRIKHTRRKQKNKKKAKKEIDHKEEERKKLLITKENVDIGHHSYVEACQLLETAPIRKVKEQLKETEICLQ HVGLNTKDVIALTYALLNNNRVESLDLEDNRLTHEAILHVVEVLRHNITLSSLSLSDNKFSPNCALVLADAITNSTWLTH LSLSGCSLGDDGARHIGYLLKNNVSLVWLNLSNNAIGETGAKFIGKALTINDTVEVLDLSWNHVRRMGAVTICKGLQTNS SLANLNLAWNGFAYEGGIALEEVLKQNLALKVLDISNNRINWEGVVHISRGLRGNSVLQILKIGCNPIAMEGVQKLLQAI HTTRSSVIHISFEDIPINSKIQEIATAISNIRPFSIAHGAVTDSHFMIGIKRAPISEQDMRMVARRLDKRGEGTISYSIL ANGVRNHMREERKEDRRQEILEMKRREHRKALLNMGYNEIKPVYFTEVNMFTSSASRNFSRLLLSSASSFSSKHESVNGK EPLRLPPLAQESNRAKSASQPNIY |
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| Protein ID | pfu_aug2.0_397.1_23979.t3 |
| Definition | - |
>pfu_aug2.0_397.1_23979.t3 MSFAPIVHISRIKHTRRKQKNKKKAKKEIDHKEEERKKLLITKENVDIGHHSYVEACQLLETAPIRKVKEQLKETEICLQ HVGLNTKDVIALTYALLSLSDNKFSPNCALVLADAITNSTWLTHLSLSGCSLGDDGARHIGYLLKNNVSLVWLNLSNNAI GETGAKFIGKALTINDTVEVLDLSWNHVRRMGAVTICKGLQTNSSLANLNLAWNGFAYEGGIALEEVLKQNLALKVLDIS NNRINWEGVVHISRGLRGNSVLQILKIGCNPIAMEGVQKLLQAIHTTRSSVIHISFEDIPINSKIQEIATAISNIRPFSI AHGAVTDSHFMIGIKRAPISEQDMRMVARRLDKRGEGTISYSILANGVRNHMREERKEDRRQEILEMKRREHRKALLNMG YNEIKPVYFTEVNMFTSSASRNFSRLLLSSASSFSSKHESVNGKEPLRLPPLAQESNRAKSASQPNIY |
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