Gene
| Gene Model ID | pfu_aug2.0_397.1_23980 |
|---|---|
| Locus | scaffold397.1 : 249950 ... 261839 : + |
| To GenomeBrowser | scaffold397.1:249950..261839 |
| Genes list of scaffold | scaffold397.1 |
| Synonym | pfu_aug1.0_37769.1_26800 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_397.1_23980.t1 | 1 | 1 | Chitin_bind_3 | 16 | 161 | 4.9e-07 | 30.1 | 5.3e-11 | 7.9e-07 | 29.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_397.1_23980.t1 | gi|676462297|ref|XP_009056223.1| | hypothetical protein LOTGIDRAFT_119849, partial [Lottia gigantea] | 2.0e-37 |
Transcript
| Transcript ID | pfu_aug2.0_397.1_23980.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_397.1_23980.t1 atgtgtaacaataaagggcatcatgaatgggtacaatggacgcaaaacgaagggaaatgtggagtttgcggcgatccata cacgggacctttgacccatgatgacaacggtatctacgctagcggcatcgtgtcaaggtcgtttatacaaggtggatttg tcaatgtcacagtagaaatccttagtaatttgttaggatattttgaattccgtctatgtccaaggaacagcaccgaccaa aaacttacacaggagtgttttgacaaacatacattgtggatcgaggagtcgtgggatacacgatatttcgttggtagccg cggtggtatatatgatctacacgttagacttccggaggatataacttgctcaaaatgtgttttccagtggaaattcagta cagggtataggactggtggtataaacaaatgtgcgtgcatgggatgtgggcagcaagaacagtttttcaattgtgcagat atagaaatccgtagcagattacaaaatgatacattctatgagagaactaggcccaatcttcatgagcctttattcatgct tccgcccagtgcaagtaatatatcagattccgacgtacaaagacttcagcaattcatagcagcattcccagatccaaaag gaatggaaatgccagttcaatttaatttcatgtcacaagatccatttccatttgataagacattgtctacaggagaaaaa cctcgagaaattgttcctgttggaatgggtgcaccttcgtttttggacaaattattcatgaattttggatcggaaacgaa acctatacgtcctttaccaaaaataaggggaataaatgtggatttcgaaaaaccgaaagagacccctacagcgacagaga caacaagttacagccaacttagagaaacaactacaaaagcttcaactaccttcagacctacatttatccctcctccagtc atagtgccaaaagagaggcctcctccgcccatatcaatcgtcccttttggtgtttactcaaccacaacagaggccactcc gccaacattgaagcgcttgggaataccaattcagatgacggatatgtatgacatagtcacaccaagtgctgacagtgggc agatgggatctgccatgacaatccctctattttcagcattttcagcatcatcagacaatggttcctctcaaagtaaagaa gaatgcaagccatcttcacctactttcagatgtcgtggaaaaggacagtatctaaatacagaaggcatagacaaatggtg tgtaatgaactgtcgcactggaaactgcgctacattcatgtgtgactgtgattgcgggaaaataagggtaaaagagaaaa gctgtcatgcgataggaacatttgaatctattccaggaatggacgagtggtgtacaaatgtatgtgctggggataattgt ccgtctaacgtttgtaatgttgagaaatgccgtcgtagcctagcaaggtag |
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Protein
| Protein ID | pfu_aug2.0_397.1_23980.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_397.1_23980.t1 MCNNKGHHEWVQWTQNEGKCGVCGDPYTGPLTHDDNGIYASGIVSRSFIQGGFVNVTVEILSNLLGYFEFRLCPRNSTDQ KLTQECFDKHTLWIEESWDTRYFVGSRGGIYDLHVRLPEDITCSKCVFQWKFSTGYRTGGINKCACMGCGQQEQFFNCAD IEIRSRLQNDTFYERTRPNLHEPLFMLPPSASNISDSDVQRLQQFIAAFPDPKGMEMPVQFNFMSQDPFPFDKTLSTGEK PREIVPVGMGAPSFLDKLFMNFGSETKPIRPLPKIRGINVDFEKPKETPTATETTSYSQLRETTTKASTTFRPTFIPPPV IVPKERPPPPISIVPFGVYSTTTEATPPTLKRLGIPIQMTDMYDIVTPSADSGQMGSAMTIPLFSAFSASSDNGSSQSKE ECKPSSPTFRCRGKGQYLNTEGIDKWCVMNCRTGNCATFMCDCDCGKIRVKEKSCHAIGTFESIPGMDEWCTNVCAGDNC PSNVCNVEKCRRSLAR |
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