Gene
| Gene Model ID | pfu_aug2.0_397.1_23983 |
|---|---|
| Locus | scaffold397.1 : 286420 ... 291014 : + |
| To GenomeBrowser | scaffold397.1:286420..291014 |
| Genes list of scaffold | scaffold397.1 |
| Synonym | pfu_aug1.0_22819.1_69517 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| peroxisomal fatty acid beta-oxidation multifunctional protein aim1-like | GO:0008270 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_397.1_23983.t1 | 1 | 1 | 3HCDH_N | 3 | 105 | 6.1e-27 | 94.4 | 4.8e-30 | 9.0e-27 | 93.8 |
| pfu_aug2.0_397.1_23983.t1 | 1 | 1 | zf-C3HC4_3 | 171 | 218 | 3.5e-14 | 52.2 | 3.1e-17 | 5.8e-14 | 51.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_397.1_23983.t1 | gi|585720784|ref|XP_006813149.1| | PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional protein AIM1-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_397.1_23983.t1 | gi|390362099|ref|XP_003730074.1| | PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional protein AIM1 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_397.1_23983.t1 | gi|391325998|ref|XP_003737513.1| | PREDICTED: uncharacterized protein LOC100901710 [Metaseiulus occidentalis] | 0.0 |
| pfu_aug2.0_397.1_23983.t1 | gi|196011824|ref|XP_002115775.1| | hypothetical protein TRIADDRAFT_59820 [Trichoplax adhaerens] | 0.0 |
| pfu_aug2.0_397.1_23983.t1 | gi|241999412|ref|XP_002434349.1| | conserved hypothetical protein [Ixodes scapularis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_397.1_23983.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_397.1_23983.t1 atgagcagacttgaagaaacagtttgtgatgcagacattattctggaggcagttaaagaagacctggaaatcaagaggga tttatttgaaagaatttcacatttatgcaagcctgatgctatcattgccagcagttctctcagaatcaaagtagatgaca tagtatcaagaacagagcataaacataggacgatgggtctgcggttcctgttccccgtatattacattcctgaggtggag ataactcctacacagtacaccgcacaggctgctgtacagaaagtccgagctatgctggagagaatgggaaagactctttt ctttcggtctggtgctcaaccattggttctttcagaagaacaaagagaggagagaaaaatagcacgtctggaacagctga agagctcctctggtatatctatgatgtttgagaagaaaattcccttgctggctcacgagggaaactcaacaagtagccat gaccaagatacagagagatcagccaaccaagacaaggaatgtgccatttgttttgataacgacagagactgtttgctgtg tccatgtcatcacatgattacgtgccacgaatgctcaaagatgttactgaatcgacgtgacggctgccctatttgccgta aagacattaaggaaattatcaaagtctttcactcttag |
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Protein
| Protein ID | pfu_aug2.0_397.1_23983.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_397.1_23983.t1 MSRLEETVCDADIILEAVKEDLEIKRDLFERISHLCKPDAIIASSSLRIKVDDIVSRTEHKHRTMGLRFLFPVYYIPEVE ITPTQYTAQAAVQKVRAMLERMGKTLFFRSGAQPLVLSEEQREERKIARLEQLKSSSGISMMFEKKIPLLAHEGNSTSSH DQDTERSANQDKECAICFDNDRDCLLCPCHHMITCHECSKMLLNRRDGCPICRKDIKEIIKVFHS |
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