Gene
| Gene Model ID | pfu_aug2.0_3973.1_12556 |
|---|---|
| Locus | scaffold3973.1 : 1 ... 14655 : - |
| To GenomeBrowser | scaffold3973.1:1..14655 |
| Genes list of scaffold | scaffold3973.1 |
| Synonym | pfu_aug1.0_3737.1_16177 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3973.1_12556.t1 | 3 | 1 | TPX2_importin | 177 | 217 | 2.0e-22 | 80.0 | 0.98 | 15000.0 | -4.2 |
| pfu_aug2.0_3973.1_12556.t1 | 3 | 2 | TPX2_importin | 324 | 457 | 2.0e-22 | 80.0 | 0.079 | 1200.0 | -0.6 |
| pfu_aug2.0_3973.1_12556.t1 | 3 | 3 | TPX2_importin | 503 | 644 | 2.0e-22 | 80.0 | 1.4e-26 | 2.0e-22 | 80.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3973.1_12556.t1 | gi|524867040|ref|XP_005090333.1| | PREDICTED: targeting protein for Xklp2 homolog isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_3973.1_12556.t1 | gi|524867038|ref|XP_005090332.1| | PREDICTED: targeting protein for Xklp2 homolog isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_3973.1_12556.t1 | gi|524867042|ref|XP_005090334.1| | PREDICTED: targeting protein for Xklp2 homolog isoform X3 [Aplysia californica] | 0.0 |
| pfu_aug2.0_3973.1_12556.t1 | gi|72134753|ref|XP_798362.1| | PREDICTED: targeting protein for Xklp2 homolog [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_3973.1_12556.t1 | gi|698382770|ref|XP_009808355.1| | PREDICTED: targeting protein for Xklp2 [Gavia stellata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_3973.1_12556.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3973.1_12556.t1 atggaagattgcagctatgagtttaatgctccacaatatcatgattttagaaatcatcgtgatgacgacgatgttgaatc atatttcgatgttgatcatgagaatggaattgccaatgaatacccagatcctgagcctgggggaaatgacatatgggatc agaaatctgaccaatcaggagtcggctgggagaacaaaccagactctcccaagggaagctctaaccaacataataaaggt gtaaatgatgagggggtacatacccccaccccagggaatcgcagactgacaaggtccatgtgtgccacacccgtcaatga taaaggattaccagaggctacagagcccacaccctcagggaaagttacagaggagaaagaggaatatcactctgccccag gtacaccagaatcaacacagtctactggtacaccagaatcaacacagtctactggtaagtcccagccaattaaacctgta acttcaatcggagacgcctctaaatcgactgaccagagttcaagatcaagagccggagaacgtcatgaaaggaacaactc cacggaaaaagtatcggttaaacatacaaggtctgcatccctcagacgagctcactccattgaacgtttgaaccaagctc aacgaggcagaactctaggagtgaagagtcctgtaaataacgaactgagtcacaagaaccacagacgctctggcagtaac gttccaattaaacgtgcagagtccattgaaaaactgaacacaccaagaactaggtcacaatcacttaaacgtacacattc aacagactctgaagacaacagaacctcaaaagctgcacgaatttctaggtctgcatcagttagaagcttggacacaagtg caggacaaagacccagatctgattcagcatcatccgtgcgttctaatgtatcggagggtaaatcggatggacctacgtat aagatgccaaaactaaccataccttcaactccgacgtttatgaaacgaaaaccaatgagcaaacccgaccgtgtgatgaa cgcagaggagaaggagctagaagagattgcccacatgcgtaaggagctggccaaaaaacgtgcaatgtcacaaaagtctt atcagaaagctatgacgtcatcaggttacgtacctcaccactccaagaaagagccgacaatgcctgtggacattcacttc agcacagacgccaggatcaaggcacagccggtagtaccgaatgagaaaccagcagattttacacgtagcctgcggtcttc aagtaaagaaccccccgctcctccacagaacaaagccttaacacgcccggaaccattcgcattatcagagagcagaaaac gtaaagtagaacctgaatcacaaacttctaacggcttcaaatccatggcagaaaatgtacaagctttccatcgacaaaca cccgagagattcagatcaaaagtagtgggtccgccacagcgttgtactcgtggtaaatcacaaggagatcttacgatacc taaaacaccacaactagagactcgcagtcgtactcgtcaggtccacgtaccgagtcagaaagagctggaggagcaagaga tagaggagatgaaaaagtaccaaataaaagccaatcctgtgaatcacagaatcctaacggaaccgtgtgtcggagttaag aaggtgacacccaaacccttaacaaaaccagaggagttcaatcttcataaatcacataacgtccgaggtaacagaagtca ggaagaagaacggtaccagttccatgctaacccctgtcctacaaagatcctagaacatcctgtgggtgttaagccagcca aggggattccccttacacatcctcagtcacctgctttcgccttgaaacatcgagtaagaatgccactggaaccagaggaa gagaaaaaggtggggtttgatatacaggtcatg |
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Protein
| Protein ID | pfu_aug2.0_3973.1_12556.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3973.1_12556.t1 MEDCSYEFNAPQYHDFRNHRDDDDVESYFDVDHENGIANEYPDPEPGGNDIWDQKSDQSGVGWENKPDSPKGSSNQHNKG VNDEGVHTPTPGNRRLTRSMCATPVNDKGLPEATEPTPSGKVTEEKEEYHSAPGTPESTQSTGTPESTQSTGKSQPIKPV TSIGDASKSTDQSSRSRAGERHERNNSTEKVSVKHTRSASLRRAHSIERLNQAQRGRTLGVKSPVNNELSHKNHRRSGSN VPIKRAESIEKLNTPRTRSQSLKRTHSTDSEDNRTSKAARISRSASVRSLDTSAGQRPRSDSASSVRSNVSEGKSDGPTY KMPKLTIPSTPTFMKRKPMSKPDRVMNAEEKELEEIAHMRKELAKKRAMSQKSYQKAMTSSGYVPHHSKKEPTMPVDIHF STDARIKAQPVVPNEKPADFTRSLRSSSKEPPAPPQNKALTRPEPFALSESRKRKVEPESQTSNGFKSMAENVQAFHRQT PERFRSKVVGPPQRCTRGKSQGDLTIPKTPQLETRSRTRQVHVPSQKELEEQEIEEMKKYQIKANPVNHRILTEPCVGVK KVTPKPLTKPEEFNLHKSHNVRGNRSQEEERYQFHANPCPTKILEHPVGVKPAKGIPLTHPQSPAFALKHRVRMPLEPEE EKKVGFDIQVM |
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