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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_3974.1_15903
Locus scaffold3974.1 : 1 ... 8838 : +
To GenomeBrowser scaffold3974.1:1..8838
Genes list of scaffold scaffold3974.1
Synonym pfu_aug1.0_1725.1_66085

Manual annotation
Annotation by Blast2GO
Annotation GO
cation transporter family protein GO:0004889 GO:0016021 GO:0030054 GO:0045211 GO:0098655

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_3974.1_15903.t1 3 1 Neur_chan_LBD 1 37 1.2e-40 138.9 5.2e-14 1.5e-10 40.5
pfu_aug2.0_3974.1_15903.t1 2 1 Neur_chan_memb 56 112 9.7e-31 107.4 0.0058 17.0 5.1
pfu_aug2.0_3974.1_15903.t1 3 2 Neur_chan_LBD 64 94 1.2e-40 138.9 0.32 960.0 -1.3
pfu_aug2.0_3974.1_15903.t1 3 3 Neur_chan_LBD 134 240 1.2e-40 138.9 1.5e-32 4.4e-29 101.1
pfu_aug2.0_3974.1_15903.t1 2 2 Neur_chan_memb 247 468 9.7e-31 107.4 3.6e-34 1.1e-30 107.3

Transcript
Transcript IDpfu_aug2.0_3974.1_15903.t1
Definition-
>pfu_aug2.0_3974.1_15903.t1
gaatggtatgacgaaaaactccgatggaactcggatgattatggaggtaccggaagtattcgtatcccgagtcataacct
ttgggtaccagatgtagttttatacaataggtttttactgagaattaaatatcagaaccttgctccaaaattggaaacaa
aggagcagatctccaacaacaccaggatgcagcaaccacagcaaaatcccaaaacacccaatgtaaaaacacagaggaga
caagcacagagagacaatgaataccaacgcaaaacacagaaacatcaaacacaaaggactacgcataaaccaacaaaacc
aatgggtaaccggtgcaaacttaggacggccatctgccacgaaaatagcagaagcgtagatgactacacttccggttata
tgcaagctctggcaatggtatacgaagacggaagagtattttggggtcctgttgtacgcatgcgtagttcctgcaagatt
gatattacttacttcccttttgatgatcagacttgtaaattgaaactaggctcttgggcttatcatggttttatggttga
cgtaacaaatcgatcatctacgattgacttatccaattttgttgataatggagaatgggaactaatccaggtacgagttg
aacgaaacacggtgttctacaactgctgtccagaaccatttccggatgtgacattttatatgttactgcgcaggcgcata
aagtactacttcatgaacataataatcccatgtattattctatcattcctttgtctggctgggtttctgttgccacccga
gagcggagagaagataacgttgggtctctctgtactgctgaccataacagtgtttatgttaatggtagcggataaaatgc
cacaaacgtctgaatccatttctgtaattagtatttatctaatggttgttctgaccatgagttgtctgtccgtccttaca
tcggtatggatccttagtatacaccatcagcgaggaaaaccgaggagagttccgaaatggcttagaactataatattccg
agtggtagctgttctattttgtattaaaattcgacagttctcaggaagaaagagtgacaaagatacaaagttgaaaaagt
taaaactgtcgagaataggtatggaagatcctgaaattatccgaatggaaagaatttcggatatagatcaggactatgca
tcgatggacgcggattgctacagagacagttcgagtgacagggatgaatcattaaagacgttaatcgaggtactccgagc
ccgtcatttaacagatatgaacgaggaggaaatatttaaggaatggagagacgtggcatttgtgctagacagaatgtttt
tcgttgttttccttttggttactactgtgtctacagtttgtatcttggaaatgagaccaggtgatatcaccgacacttag

Protein
Protein IDpfu_aug2.0_3974.1_15903.t1
Definition-
>pfu_aug2.0_3974.1_15903.t1
EWYDEKLRWNSDDYGGTGSIRIPSHNLWVPDVVLYNRFLLRIKYQNLAPKLETKEQISNNTRMQQPQQNPKTPNVKTQRR
QAQRDNEYQRKTQKHQTQRTTHKPTKPMGNRCKLRTAICHENSRSVDDYTSGYMQALAMVYEDGRVFWGPVVRMRSSCKI
DITYFPFDDQTCKLKLGSWAYHGFMVDVTNRSSTIDLSNFVDNGEWELIQVRVERNTVFYNCCPEPFPDVTFYMLLRRRI
KYYFMNIIIPCIILSFLCLAGFLLPPESGEKITLGLSVLLTITVFMLMVADKMPQTSESISVISIYLMVVLTMSCLSVLT
SVWILSIHHQRGKPRRVPKWLRTIIFRVVAVLFCIKIRQFSGRKSDKDTKLKKLKLSRIGMEDPEIIRMERISDIDQDYA
SMDADCYRDSSSDRDESLKTLIEVLRARHLTDMNEEEIFKEWRDVAFVLDRMFFVVFLLVTTVSTVCILEMRPGDITDT

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