Gene
Gene Model ID | pfu_aug2.0_3974.1_15903 |
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Locus | scaffold3974.1 : 1 ... 8838 : + |
To GenomeBrowser | scaffold3974.1:1..8838 |
Genes list of scaffold | scaffold3974.1 |
Synonym | pfu_aug1.0_1725.1_66085 |
Manual annotation
Annotation by Blast2GO
Annotation | GO |
---|---|
cation transporter family protein | GO:0004889 GO:0016021 GO:0030054 GO:0045211 GO:0098655 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_3974.1_15903.t1 | 3 | 1 | Neur_chan_LBD | 1 | 37 | 1.2e-40 | 138.9 | 5.2e-14 | 1.5e-10 | 40.5 |
pfu_aug2.0_3974.1_15903.t1 | 2 | 1 | Neur_chan_memb | 56 | 112 | 9.7e-31 | 107.4 | 0.0058 | 17.0 | 5.1 |
pfu_aug2.0_3974.1_15903.t1 | 3 | 2 | Neur_chan_LBD | 64 | 94 | 1.2e-40 | 138.9 | 0.32 | 960.0 | -1.3 |
pfu_aug2.0_3974.1_15903.t1 | 3 | 3 | Neur_chan_LBD | 134 | 240 | 1.2e-40 | 138.9 | 1.5e-32 | 4.4e-29 | 101.1 |
pfu_aug2.0_3974.1_15903.t1 | 2 | 2 | Neur_chan_memb | 247 | 468 | 9.7e-31 | 107.4 | 3.6e-34 | 1.1e-30 | 107.3 |
Transcript
Transcript ID | pfu_aug2.0_3974.1_15903.t1 |
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Definition | - |
>pfu_aug2.0_3974.1_15903.t1 gaatggtatgacgaaaaactccgatggaactcggatgattatggaggtaccggaagtattcgtatcccgagtcataacct ttgggtaccagatgtagttttatacaataggtttttactgagaattaaatatcagaaccttgctccaaaattggaaacaa aggagcagatctccaacaacaccaggatgcagcaaccacagcaaaatcccaaaacacccaatgtaaaaacacagaggaga caagcacagagagacaatgaataccaacgcaaaacacagaaacatcaaacacaaaggactacgcataaaccaacaaaacc aatgggtaaccggtgcaaacttaggacggccatctgccacgaaaatagcagaagcgtagatgactacacttccggttata tgcaagctctggcaatggtatacgaagacggaagagtattttggggtcctgttgtacgcatgcgtagttcctgcaagatt gatattacttacttcccttttgatgatcagacttgtaaattgaaactaggctcttgggcttatcatggttttatggttga cgtaacaaatcgatcatctacgattgacttatccaattttgttgataatggagaatgggaactaatccaggtacgagttg aacgaaacacggtgttctacaactgctgtccagaaccatttccggatgtgacattttatatgttactgcgcaggcgcata aagtactacttcatgaacataataatcccatgtattattctatcattcctttgtctggctgggtttctgttgccacccga gagcggagagaagataacgttgggtctctctgtactgctgaccataacagtgtttatgttaatggtagcggataaaatgc cacaaacgtctgaatccatttctgtaattagtatttatctaatggttgttctgaccatgagttgtctgtccgtccttaca tcggtatggatccttagtatacaccatcagcgaggaaaaccgaggagagttccgaaatggcttagaactataatattccg agtggtagctgttctattttgtattaaaattcgacagttctcaggaagaaagagtgacaaagatacaaagttgaaaaagt taaaactgtcgagaataggtatggaagatcctgaaattatccgaatggaaagaatttcggatatagatcaggactatgca tcgatggacgcggattgctacagagacagttcgagtgacagggatgaatcattaaagacgttaatcgaggtactccgagc ccgtcatttaacagatatgaacgaggaggaaatatttaaggaatggagagacgtggcatttgtgctagacagaatgtttt tcgttgttttccttttggttactactgtgtctacagtttgtatcttggaaatgagaccaggtgatatcaccgacacttag |
Protein
Protein ID | pfu_aug2.0_3974.1_15903.t1 |
---|---|
Definition | - |
>pfu_aug2.0_3974.1_15903.t1 EWYDEKLRWNSDDYGGTGSIRIPSHNLWVPDVVLYNRFLLRIKYQNLAPKLETKEQISNNTRMQQPQQNPKTPNVKTQRR QAQRDNEYQRKTQKHQTQRTTHKPTKPMGNRCKLRTAICHENSRSVDDYTSGYMQALAMVYEDGRVFWGPVVRMRSSCKI DITYFPFDDQTCKLKLGSWAYHGFMVDVTNRSSTIDLSNFVDNGEWELIQVRVERNTVFYNCCPEPFPDVTFYMLLRRRI KYYFMNIIIPCIILSFLCLAGFLLPPESGEKITLGLSVLLTITVFMLMVADKMPQTSESISVISIYLMVVLTMSCLSVLT SVWILSIHHQRGKPRRVPKWLRTIIFRVVAVLFCIKIRQFSGRKSDKDTKLKKLKLSRIGMEDPEIIRMERISDIDQDYA SMDADCYRDSSSDRDESLKTLIEVLRARHLTDMNEEEIFKEWRDVAFVLDRMFFVVFLLVTTVSTVCILEMRPGDITDT |