Gene
| Gene Model ID | pfu_aug2.0_3980.1_02534 |
|---|---|
| Locus | scaffold3980.1 : 1 ... 13325 : - |
| To GenomeBrowser | scaffold3980.1:1..13325 |
| Genes list of scaffold | scaffold3980.1 |
| Synonym | pfu_aug1.0_14650.1_61393 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3980.1_02534.t1 | 4 | 1 | zf-CW | 36 | 47 | 3.5e-14 | 52.2 | 1.9 | 6900.0 | -3.2 |
| pfu_aug2.0_3980.1_02534.t1 | 4 | 2 | zf-CW | 59 | 106 | 3.5e-14 | 52.2 | 9.3e-18 | 3.5e-14 | 52.2 |
| pfu_aug2.0_3980.1_02534.t1 | 2 | 1 | PWWP | 128 | 211 | 2.3e-13 | 50.1 | 6.3e-17 | 2.3e-13 | 50.1 |
| pfu_aug2.0_3980.1_02534.t1 | 4 | 3 | zf-CW | 270 | 284 | 3.5e-14 | 52.2 | 2.1 | 7800.0 | -3.4 |
| pfu_aug2.0_3980.1_02534.t1 | 4 | 4 | zf-CW | 393 | 403 | 3.5e-14 | 52.2 | 1.4 | 5200.0 | -2.8 |
| pfu_aug2.0_3980.1_02534.t1 | 2 | 2 | PWWP | 394 | 423 | 2.3e-13 | 50.1 | 1.2 | 4600.0 | -2.1 |
| pfu_aug2.0_3980.1_02534.t1 | 1 | 1 | ARID | 425 | 512 | 1.8e-16 | 59.7 | 1.3e-19 | 5.0e-16 | 58.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3980.1_02534.t1 | gi|676434978|ref|XP_009047408.1| | hypothetical protein LOTGIDRAFT_238097 [Lottia gigantea] | 5.60519e-45 |
| pfu_aug2.0_3980.1_02534.t1 | gi|260821646|ref|XP_002606143.1| | hypothetical protein BRAFLDRAFT_102742 [Branchiostoma floridae] | 4.0e-38 |
| pfu_aug2.0_3980.1_02534.t1 | gi|602665045|ref|XP_007438112.1| | PREDICTED: zinc finger CW-type PWWP domain protein 2 [Python bivittatus] | 1.0e-24 |
| pfu_aug2.0_3980.1_02534.t1 | gi|556970341|ref|XP_005993777.1| | PREDICTED: zinc finger CW-type PWWP domain protein 2 [Latimeria chalumnae] | 3.0e-24 |
| pfu_aug2.0_3980.1_02534.t1 | gi|634822099|ref|XP_007934423.1| | PREDICTED: zinc finger CW-type PWWP domain protein 2 [Orycteropus afer afer] | 1.0e-23 |
Transcript
| Transcript ID | pfu_aug2.0_3980.1_02534.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3980.1_02534.t1 atggaacagctccatttccggcctactgaggatgcttactacaatgcatgagaacagagaaaaacagcagagattattga gtttggattgggcagtgaagatttgttctgtagtcaaaaatctaaaaattcaacatcaactaatgctagtaaaaagagac agatagaggactatacctgggtgcagtgcgacaatctggaatgtcaaaaatggcggaaaattcccgtagatgacgcagag ggactggacgacgtagactggttctgtcatatgaacactgatcccgtacataacacgtgtgagagcgtagaggaggacta ccaggcgtacgacagactcgctaagagactcggctataaatatgtgatgtcacacctgactgaaggaacggtggtttggg ctaaaatgactggatactgcaggtggccggccattatcagtaaggatccctcttgtgacctgtactacatggttgataat gagggacatccctcacgatatcacgtagagtacctgggtaaacaacacagccatgcctggattccatctaaacttataga tctgtatggacacagagcagagaaagataactatactcagaaacaatacaataagaaagattctaaggggaattccaaaa agaaaggaaagaagaaaaagaggatttgcttaaaggcagagcttggatataagaaactatctgtgtacaaacgatctccg gtagaagctgctgtagaggaagcggagagtttactccccttgtctccgaggaaaaggttgatgaaatgtacatttcaacc taaatctaataatacccctatcagtaagaaaaattgtcctgctccagaaagaaatacaaagaagactgacataaaccgag tgtcattcacgctagaaaacggaaaaactagaccagaatcatcaagcacttctggaggggatattgtttatagttacatg aaccagcagtatgcaaggaacactggtcaaaactctcagggtcagaagaaactagaaaatactgtgcctctcaaactttg taagaaagatcctacagtgtttgaatttaaggactgtaaactgacccccaataagtttgagaacaagacatgtaaattag gaaaaattacaaaccttgaaattcagagaactgtggagaaaccagaagtatgtggcgagttaacaaagtttgaatgctcc catatggagatgaagaacacattagtgaataagagcaaggaggagagatttaagatagatattgagatgtacaaaagaaa tgagaaagcctttgaccatgatttgttcagatttatggagagaaatgggatgaagatcaagaaaaggccagtctggcaca acacgcctataggtctgttccagctattcttggcagtgtatgaaagaggtggctaccaacaggtaagcacaaattggaag tggactgccgtgtacagggaactaaccaacatgggacatggcagtgctggacatactgccaagagtttctacggaaggca tttatacccctacgagctgtttgtgaaaggagaaaattatgatggtgtgttagagaagatacagagtggtaagaaagtga gtggatatgtaaaaaacgttacaaaacagaaagaagtagaacaacagacagagtcggaaaaacaggaggaagtggagcaa tatgatgacctagattacgtactga |
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Protein
| Protein ID | pfu_aug2.0_3980.1_02534.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3980.1_02534.t1 MEQLHFRPTEDAYYNAXEQRKTAEIIEFGLGSEDLFCSQKSKNSTSTNASKKRQIEDYTWVQCDNLECQKWRKIPVDDAE GLDDVDWFCHMNTDPVHNTCESVEEDYQAYDRLAKRLGYKYVMSHLTEGTVVWAKMTGYCRWPAIISKDPSCDLYYMVDN EGHPSRYHVEYLGKQHSHAWIPSKLIDLYGHRAEKDNYTQKQYNKKDSKGNSKKKGKKKKRICLKAELGYKKLSVYKRSP VEAAVEEAESLLPLSPRKRLMKCTFQPKSNNTPISKKNCPAPERNTKKTDINRVSFTLENGKTRPESSSTSGGDIVYSYM NQQYARNTGQNSQGQKKLENTVPLKLCKKDPTVFEFKDCKLTPNKFENKTCKLGKITNLEIQRTVEKPEVCGELTKFECS HMEMKNTLVNKSKEERFKIDIEMYKRNEKAFDHDLFRFMERNGMKIKKRPVWHNTPIGLFQLFLAVYERGGYQQVSTNWK WTAVYRELTNMGHGSAGHTAKSFYGRHLYPYELFVKGENYDGVLEKIQSGKKVSGYVKNVTKQKEVEQQTESEKQEEVEQ YDDLDYVL |
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