Gene
| Gene Model ID | pfu_aug2.0_3980.1_02535 |
|---|---|
| Locus | scaffold3980.1 : 36358 ... 50059 : - |
| To GenomeBrowser | scaffold3980.1:36358..50059 |
| Genes list of scaffold | scaffold3980.1 |
| Synonym | pfu_aug1.0_93837.1_42305 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3980.1_02535.t1 | 1 | 1 | NACHT | 176 | 287 | 4.4e-09 | 36.2 | 1.1e-11 | 5.4e-08 | 32.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3980.1_02535.t1 | gi|700319262|ref|XP_009911601.1| | PREDICTED: protein NLRC5-like isoform X2 [Haliaeetus albicilla] | 1.0e-07 |
| pfu_aug2.0_3980.1_02535.t1 | gi|700319258|ref|XP_009911584.1| | PREDICTED: protein NLRC5-like isoform X1 [Haliaeetus albicilla] | 1.0e-07 |
| pfu_aug2.0_3980.1_02535.t1 | gi|729724531|ref|XP_010581628.1| | PREDICTED: protein NLRC5 isoform X11 [Haliaeetus leucocephalus] | 2.0e-07 |
| pfu_aug2.0_3980.1_02535.t1 | gi|729724519|ref|XP_010581577.1| | PREDICTED: protein NLRC5 isoform X5 [Haliaeetus leucocephalus] | 3.0e-07 |
| pfu_aug2.0_3980.1_02535.t1 | gi|729724529|ref|XP_010581620.1| | PREDICTED: protein NLRC5 isoform X10 [Haliaeetus leucocephalus] | 3.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_3980.1_02535.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3980.1_02535.t1 caagacaaggtcaagaaatcaaagaagaactacaaggacagctgagtcctattcagcaggaatcaaatgaacataggaaa ctgataacagacatgaagcaaagaattccatatggaaaagtaccttcaagacagggtgtaaggaaaatgagggaaaagct aatggaaatcaatgaccagataacccgagtcatccaactttcacctctacaggacacaggagaggatttacctatagagc tgttatatgcctcagtagtcatctgtgaggaccaaaagtatgttacaatgggaattgattcatcacaagacatggaggaa attacaagatatgaaaatttaccaaagaacaagggagtacttaaaagaacttgggaacgaataaaaagtagtaggttgtt ctcttcaaaatttaatacaatgccaacaacagactttgatagaggaagttataaatataacaggtcttctaggagggaag tcacgaacccagatgatatatttaaaaaaaacggtaaatacgtaagaaggatatatatgtcaggagatgccgcacacggt aaaactacatactgtgtgtggcttcttcggaaatggttgaacgctaaaagaaaagaaaaaatggtacaacaaaaatttga taattgggaaaaggaactgaagaaatttgacttcgtatttctgattaagttccgtaatgtcaatgatccaaatctagctt cagttgtagatatgatctgccaggacgcgtttgagagtgataaagactgccatgatgccattcgtcacgtattatcatca gacgaatataaaagtcttataatattggatggactggatgaatggaacacgaacagtaaaagcaaaatgccagaaattga cgtgtcaggtagtgtaacgtgcttcatttccatgcgaccatgggtgcttccattattgttaaagaaaccacaacacagtg acagagttatagaaatttgtggtttaagtgacactgggatggaaaatattattaagaatgtacttgtaaatcattataag ttggaagaggactcaccaaaatatacacaaacaaatgacaaaatagtgaaatctttaaaagataaaagtttgaaatcttt catgcagattcccttgttagctgtagtatgtgtacagatatggtatgatgggaaacaggtgggggacagtataacaagct tctatgctgagatgttaaacatgttaatagatagagcgaatgaaaaacataaaagtgaaatagaacatgacaaaacagaa aattttgaattacctcaaattttctctgtttatagtaacattgagaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnncagagaattttgaattacctcaacttttgtctgtttatgataacattgaaaactgtagttct gtactattaaaattaggaaaagtagcatgtgaaggtctgttatctaatgaaaccaacttagtatttcagaaaagtcaatt agaaaaagaaataggtgtgagagaattacagtttgcactagatgttggattgatcagtcagaaggaagcacgcagtctta caacaaaaaatgtaagtgttcatttctttcataaatctatacaagagttcctggctgtaatcttcattgtaacaaacaaa gaggtaggtgactcattctgtaaacatctgtccagtgtcgatgtcatcatggaggtgtctaatgttatcatgtttatatg tggtatgtgtccgtccctgggtagtgtaatatcacagcgtgttgtaagtgtgacagacagtgacacagagacctgtaaat acagagaattacagggaggtagcagtacagtggatggactgtacaaactacaggtaagttggtacagggagttacaggac agacagacagacagcccagtgacgttccatgtatcagatgtttatctgactgagtacagtgacatagagacagtgagggg gactagggacgtcctgtctgatccccatgtagacataaggtcactgtccttattatatgtacctactgacatagaacgtg gtgttactaacacagaattaaataactttctgtgtaacaaacaactaacatgttcacttgacatggtctatatttatgat gttaccactggtaggtcagtgttccctatctgtataccctcacttaaaactttatacctaggtaatgtaaaaataaatac tgaccttgatgatgatgtttgtcctccactgctgacagacatgacatcactacgtgagttagatctgtataaggtgaccc tcggtgacagaggactgggtctgtctgctgacatggcacatatagagaaggtaaggttagtgtatgtaaatatgtcatca tcacaatggcaacagtttatactgtctgtactaaacatacaacatagatttaatgttgaactacgtgacacaaatattga tgatgaatccatgacaaagatccggtcgtctcctgacttcaatgtaacacgggatgttgtggatgagtatacacgtaggt ataggttctacttcaccaaagtatgggcaccacaggtcacacagtatgatgatgatagaaatgaaatactgtacagaaga ttatag |
|
Protein
| Protein ID | pfu_aug2.0_3980.1_02535.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3980.1_02535.t1 RQGQEIKEELQGQLSPIQQESNEHRKLITDMKQRIPYGKVPSRQGVRKMREKLMEINDQITRVIQLSPLQDTGEDLPIEL LYASVVICEDQKYVTMGIDSSQDMEEITRYENLPKNKGVLKRTWERIKSSRLFSSKFNTMPTTDFDRGSYKYNRSSRREV TNPDDIFKKNGKYVRRIYMSGDAAHGKTTYCVWLLRKWLNAKRKEKMVQQKFDNWEKELKKFDFVFLIKFRNVNDPNLAS VVDMICQDAFESDKDCHDAIRHVLSSDEYKSLIILDGLDEWNTNSKSKMPEIDVSGSVTCFISMRPWVLPLLLKKPQHSD RVIEICGLSDTGMENIIKNVLVNHYKLEEDSPKYTQTNDKIVKSLKDKSLKSFMQIPLLAVVCVQIWYDGKQVGDSITSF YAEMLNMLIDRANEKHKSEIEHDKTENFELPQIFSVYSNIENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXENFELPQLLSVYDNIENCSSVLLKLGKVACEGLLSNETNLVFQKSQLEKEIGVRELQFALDVGLISQKEARSLT TKNVSVHFFHKSIQEFLAVIFIVTNKEVGDSFCKHLSSVDVIMEVSNVIMFICGMCPSLGSVISQRVVSVTDSDTETCKY RELQGGSSTVDGLYKLQVSWYRELQDRQTDSPVTFHVSDVYLTEYSDIETVRGTRDVLSDPHVDIRSLSLLYVPTDIERG VTNTELNNFLCNKQLTCSLDMVYIYDVTTGRSVFPICIPSLKTLYLGNVKINTDLDDDVCPPLLTDMTSLRELDLYKVTL GDRGLGLSADMAHIEKVRLVYVNMSSSQWQQFILSVLNIQHRFNVELRDTNIDDESMTKIRSSPDFNVTRDVVDEYTRRY RFYFTKVWAPQVTQYDDDRNEILYRRL |
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