Gene
| Gene Model ID | pfu_aug2.0_4.1_13309 |
|---|---|
| Locus | scaffold4.1 : 44666 ... 68030 : + |
| To GenomeBrowser | scaffold4.1:44666..68030 |
| Genes list of scaffold | scaffold4.1 |
| Synonym | pfu_aug1.0_7210.1_38478 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4.1_13309.t1 | 5 | 1 | fn3 | 218 | 321 | 3.0e-08 | 33.6 | 5.2e-05 | 0.39 | 10.8 |
| pfu_aug2.0_4.1_13309.t1 | 5 | 2 | fn3 | 334 | 373 | 3.0e-08 | 33.6 | 0.12 | 920.0 | 0.0 |
| pfu_aug2.0_4.1_13309.t1 | 5 | 3 | fn3 | 451 | 522 | 3.0e-08 | 33.6 | 1.1e-08 | 8.0e-05 | 22.6 |
| pfu_aug2.0_4.1_13309.t1 | 5 | 4 | fn3 | 586 | 611 | 3.0e-08 | 33.6 | 0.33 | 2400.0 | -1.3 |
| pfu_aug2.0_4.1_13309.t1 | 5 | 5 | fn3 | 722 | 761 | 3.0e-08 | 33.6 | 0.25 | 1900.0 | -1.0 |
Transcript
| Transcript ID | pfu_aug2.0_4.1_13309.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4.1_13309.t1 atgaccagtatcccttggtttgccaaagcattgtatgtacttgcccaaacggaggcgtggtggttgccgaaagatcaagg aacagctataaaagttcatggcaaacacggagtatatcagtttggcgagaaaatcagcttcaattgcacaggggaaaatg ctcctgaatttgacatacaaatcaacaaccatgatatttctagaaacatgaccaaagtgcttgggccgaaagttctgtat tccgctatatccatcgatccgcagtactttaaagttggtgacaatttaatcgtttgtaatggtggtacaatgaccgagga catacgtgttgagagttaccttgtccgtgatgtaactgacattaaatgtattgtccgtaggccagtaaacttattggaat gtcgttggaccattggggagtatcatttcaaagaattcatcaacgtaacattttctgtgaagaggtctgacaatgaccaa tggagttcgtgccatccaacgataacccctgtccaatcctgtccttttcaagacttcaatgattctgactttatccactt aaaactacaggtcaaaaataccaaaagaagcatctctaaaacgtttgagatgatgaatatttcacaattatcactagtta agccagtcatggtagagaacgtaagagcatcaaatattacgagtagaacagtgctgattcaatggagtctcgcccatgag gctgaaacactccttgtcagactcaatatttcatccaaattgaacagacagacatcgataccggaaagatacagaaatgg aagaattatcaagttcgtattatctgtcaacggaagcgatggacgagattaccagaatgttgtagatggaaatcagactt ctacggatgttgtcttagaatgtgatgtgaactatgatataaaggtcaaggcgagtacgtctgctgggttatcaaacttc tctgcagttctcaaagtacctgcctataaagatatttcgcccataaagaatatagtggtccaaacgccagagaatagatc ttttgtgaatatttcctggacagtgaacaataagatgtcatcttgtagcatattctggtgtacaaaaggtcaagacagtt ctaattgtgatggtgaaatgcattctaaggagacactccattctacatatcaagtaatatatcaaacatatttgacggat cctattagcttgttgaagtttggagtatccgggatatctgacacgtcatctccgtacagcagcggtatcacatgggagac ctgccgatataaattggatcaagctccagctattccagaaggtctaaacatagcacaaaaaagcccatacaaaagtctga ttgtattatggtccgatccgatatgtgactggcagtcaggatatgtgaacaaatacattgtcaagttttgtttgcagaag gacacagtggtttgcaaagaaaaagaatttcatcctcgtaaagttgcagagtacacacttgagggacttactgcatttca gaactacagcgtgcagctacaaacagtatcgccacttggtaaaaagagtccattcactgctcgagtttatggagtaccgg attcaaatgagttgaccaaccttcaaattactggcatcataattgctgcagttgtattggtcatcatatgcttaattttg tgtataatcagacaaaaatataggatgagcaagctaccatacaatgttgaagttcctgatttgtcgaagaagaccgaaga caacaatatcaacaatttgaatataaagtgccacaaaacacaagatgaagaagtatctgaatcgtcaaatcatcttcaaa tatggaataaaactgaaggccatgaaacggaccagatgacaagaaaagtaatccgtcacgtcagcgttgacagtggaaat gaaagctgtgattcggaatctctgaggagggaaaattcgatagcactagattttgaaggaaacctgaattctcaagatga ctgtgtaaaactgaatggggagaatttgaaagagtcaccgccgttgcagactgattacctcaagcaggtgtcaggtctaa gtaataatgattatatttcaaatgacacaatcattgaagtccaaccaaatgctttgaaatcacaaaacgaaatccatgac gttaaccaaaatgttttccatgttgaattagaaacaattgaagaggatgacggagacgattgtacgactttaaaaacttc agaaggtgaggatattacatcatataagatcgaaaatatagaacttccatcagactatgtcagatcacagtttgacccga atgttatgttggattatcatggctatctcccgccagacaaattgtgcagagtgcaacaaaatatcaccgtaagtggacca gatcaagcaatgcccgatggaagtatgaaaggtgttacaagcagtgaagactattcatatgtaagggtggataattttat accatgggtatcatga |
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Protein
| Protein ID | pfu_aug2.0_4.1_13309.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4.1_13309.t1 MTSIPWFAKALYVLAQTEAWWLPKDQGTAIKVHGKHGVYQFGEKISFNCTGENAPEFDIQINNHDISRNMTKVLGPKVLY SAISIDPQYFKVGDNLIVCNGGTMTEDIRVESYLVRDVTDIKCIVRRPVNLLECRWTIGEYHFKEFINVTFSVKRSDNDQ WSSCHPTITPVQSCPFQDFNDSDFIHLKLQVKNTKRSISKTFEMMNISQLSLVKPVMVENVRASNITSRTVLIQWSLAHE AETLLVRLNISSKLNRQTSIPERYRNGRIIKFVLSVNGSDGRDYQNVVDGNQTSTDVVLECDVNYDIKVKASTSAGLSNF SAVLKVPAYKDISPIKNIVVQTPENRSFVNISWTVNNKMSSCSIFWCTKGQDSSNCDGEMHSKETLHSTYQVIYQTYLTD PISLLKFGVSGISDTSSPYSSGITWETCRYKLDQAPAIPEGLNIAQKSPYKSLIVLWSDPICDWQSGYVNKYIVKFCLQK DTVVCKEKEFHPRKVAEYTLEGLTAFQNYSVQLQTVSPLGKKSPFTARVYGVPDSNELTNLQITGIIIAAVVLVIICLIL CIIRQKYRMSKLPYNVEVPDLSKKTEDNNINNLNIKCHKTQDEEVSESSNHLQIWNKTEGHETDQMTRKVIRHVSVDSGN ESCDSESLRRENSIALDFEGNLNSQDDCVKLNGENLKESPPLQTDYLKQVSGLSNNDYISNDTIIEVQPNALKSQNEIHD VNQNVFHVELETIEEDDGDDCTTLKTSEGEDITSYKIENIELPSDYVRSQFDPNVMLDYHGYLPPDKLCRVQQNITVSGP DQAMPDGSMKGVTSSEDYSYVRVDNFIPWVS |
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