Gene
| Gene Model ID | pfu_aug2.0_4.1_13315 |
|---|---|
| Locus | scaffold4.1 : 167392 ... 179465 : - |
| To GenomeBrowser | scaffold4.1:167392..179465 |
| Genes list of scaffold | scaffold4.1 |
| Synonym | pfu_aug1.0_1271.1_51247 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cystinosin-like protein | GO:0043231 GO:0044444 GO:0044708 GO:0050890 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4.1_13315.t1 | 2 | 1 | PQ-loop | 161 | 217 | 1.6e-36 | 123.6 | 7.1e-21 | 5.3e-17 | 61.1 |
| pfu_aug2.0_4.1_13315.t1 | 2 | 2 | PQ-loop | 300 | 357 | 1.6e-36 | 123.6 | 1.2e-22 | 8.5e-19 | 66.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4.1_13315.t1 | gi|524907257|ref|XP_005108750.1| | PREDICTED: cystinosin-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_4.1_13315.t1 | gi|470301335|ref|XP_004347322.1| | cystinosin-like protein [Capsaspora owczarzaki ATCC 30864] | 0.0 |
| pfu_aug2.0_4.1_13315.t1 | gi|676477662|ref|XP_009061177.1| | hypothetical protein LOTGIDRAFT_219532 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_4.1_13315.t1 | gi|597757093|ref|XP_007240282.1| | PREDICTED: cystinosin-like [Astyanax mexicanus] | 0.0 |
| pfu_aug2.0_4.1_13315.t1 | gi|591365710|ref|XP_007057719.1| | PREDICTED: cystinosin [Chelonia mydas] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_4.1_13315.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4.1_13315.t1 atggttgatcatgtgatcgaggtacagaaaaggtatgatgaccgaagagccaagagtgagagaaatatgactgctggatt ccgtcagttttggcttatattcagtttgaattcattgctagtgatacaccatgctagctgtgtgaccttaagcttctcct cagattccttgtccttacagataggtgacaccaaaacattgtctctaacaccaagcgatacattacaagcagaaactgta gtcagttttacataccagattggtaatgacatcctttatactgaggagaaaaagctgattttaccattgaaggctgtagt cataccagcgaacaccagcaagtctgtacaattcaacgtgacggcaaataaagcaggaaatgtatacctaggaataaact cctcctcagaggaacttgaggatttggaggatcagtttgtgaagattgagatagtacacaactcagtgctggtgatcgtt aacagtgttataggatggatatattttgcagcatggtccatctctttttatcctcaggtgtttgagaactggagaagaaa aagtgtgataggcctaaactttgacttcctcgcatacaacataactggctttgtggcatacggagtgttcaatgtgggcc tttactggataaaaagtgtacaggaccagtactttgaggagcatccacgtggtatcaatcctgtacaactgaacgatgta atcttcacattacatgctgtgtttgtgacgttgattacaatctttcagtgctgtatatatgatagaggtaaccagaggat atctaaggtgtgtaagctactcctgacattagcgtggttgtttattggagtatcactggtactgtcactcaccaaagtta tcacgtggctcagatatctacagttcttctcctacgtcaaactaggggtcactctgatcaagtatattcctcaggcttac atgaattatcggaggaagagcactctaggttggagtataggaaatgtactgttagatttcacagggggaagcttcagctt gcttcaaatgttcttcctggcctacaacagtgatgattggtcatctttacatgatccaacccaaatacgactgggagtca tatctccgataatatttgatcttatcttcatagttcagcactattgcctgtataggttctcgtctccgtacgaaaagttt ctcaatactcagtaa |
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Protein
| Protein ID | pfu_aug2.0_4.1_13315.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4.1_13315.t1 MVDHVIEVQKRYDDRRAKSERNMTAGFRQFWLIFSLNSLLVIHHASCVTLSFSSDSLSLQIGDTKTLSLTPSDTLQAETV VSFTYQIGNDILYTEEKKLILPLKAVVIPANTSKSVQFNVTANKAGNVYLGINSSSEELEDLEDQFVKIEIVHNSVLVIV NSVIGWIYFAAWSISFYPQVFENWRRKSVIGLNFDFLAYNITGFVAYGVFNVGLYWIKSVQDQYFEEHPRGINPVQLNDV IFTLHAVFVTLITIFQCCIYDRGNQRISKVCKLLLTLAWLFIGVSLVLSLTKVITWLRYLQFFSYVKLGVTLIKYIPQAY MNYRRKSTLGWSIGNVLLDFTGGSFSLLQMFFLAYNSDDWSSLHDPTQIRLGVISPIIFDLIFIVQHYCLYRFSSPYEKF LNTQ |
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