Gene
| Gene Model ID | pfu_aug2.0_4.1_13317 |
|---|---|
| Locus | scaffold4.1 : 184522 ... 199305 : - |
| To GenomeBrowser | scaffold4.1:184522..199305 |
| Genes list of scaffold | scaffold4.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4.1_13317.t1 | 2 | 1 | Ank_2 | 189 | 222 | 9.7e-15 | 54.6 | 1.2e-10 | 2.5e-07 | 30.9 |
| pfu_aug2.0_4.1_13317.t1 | 2 | 1 | Ank_4 | 190 | 221 | 2.2e-13 | 50.3 | 7.8e-09 | 1.7e-05 | 25.2 |
| pfu_aug2.0_4.1_13317.t1 | 2 | 1 | Ank_5 | 192 | 234 | 5.5e-15 | 55.0 | 2.6e-09 | 5.4e-06 | 26.4 |
| pfu_aug2.0_4.1_13317.t1 | 3 | 1 | Ank | 201 | 222 | 8.2e-17 | 60.0 | 1.0e-09 | 2.2e-06 | 27.2 |
| pfu_aug2.0_4.1_13317.t1 | 3 | 1 | Ank_3 | 201 | 222 | 4.0e-11 | 42.0 | 4.3e-07 | 0.00092 | 19.2 |
| pfu_aug2.0_4.1_13317.t1 | 2 | 2 | Ank_2 | 252 | 296 | 9.7e-15 | 54.6 | 8.3e-08 | 0.00017 | 21.8 |
| pfu_aug2.0_4.1_13317.t1 | 3 | 2 | Ank | 254 | 277 | 8.2e-17 | 60.0 | 1.6e-09 | 3.3e-06 | 26.6 |
| pfu_aug2.0_4.1_13317.t1 | 2 | 2 | Ank_5 | 254 | 294 | 5.5e-15 | 55.0 | 3.2e-09 | 6.8e-06 | 26.1 |
| pfu_aug2.0_4.1_13317.t1 | 2 | 2 | Ank_4 | 254 | 294 | 2.2e-13 | 50.3 | 6.9e-08 | 0.00015 | 22.2 |
| pfu_aug2.0_4.1_13317.t1 | 3 | 2 | Ank_3 | 254 | 275 | 4.0e-11 | 42.0 | 8.2e-07 | 0.0017 | 18.3 |
| pfu_aug2.0_4.1_13317.t1 | 3 | 3 | Ank | 287 | 294 | 8.2e-17 | 60.0 | 0.08 | 170.0 | 2.2 |
| pfu_aug2.0_4.1_13317.t1 | 3 | 3 | Ank_3 | 287 | 294 | 4.0e-11 | 42.0 | 1.4 | 3000.0 | -1.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4.1_13317.t1 | gi|390367765|ref|XP_003731326.1| | 4.0e-31 | |
| pfu_aug2.0_4.1_13317.t1 | gi|390349197|ref|XP_003727164.1| | 2.0e-28 | |
| pfu_aug2.0_4.1_13317.t1 | gi|291230105|ref|XP_002735009.1| | PREDICTED: ankyrin repeat domain-containing protein 32-like [Saccoglossus kowalevskii] | 1.0e-26 |
| pfu_aug2.0_4.1_13317.t1 | gi|704541056|ref|XP_010193355.1| | PREDICTED: ankyrin repeat domain-containing protein 32-like, partial [Mesitornis unicolor] | 2.0e-22 |
| pfu_aug2.0_4.1_13317.t1 | gi|13276627|emb|CAB66495.1| | hypothetical protein [Homo sapiens] | 6.0e-22 |
Transcript
| Transcript ID | pfu_aug2.0_4.1_13317.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4.1_13317.t1 atgtcaaggatatcagatggagaaagtagtgtacagaagttacgatcatctatgatctcacagatactgtggcctgggat aacacagcccaacatgaacaataaatgtagacaactcatgagtttgttctgggattccttgtgctgcagtgcaaaacaag gggataaggttatcctggtgaagtgtatgacaagtttggtttccatggtaacaagtatatgccacatgacagagatgcta ccatacttgtcatctagcgaaagtttgtttacaacgttagtgagaactaacatatttattcaggaaatggcacgtacaat taacaaatgtgagatgagtcctagctatttacagttagtattgttgtgtatccagtcccctgttatatgtctacacgtgt gctgtacgttactggcatacatggatgattatctgatcttaggggagataactgttaacgacatcactctggctgatata gttgcaaagtacttgtacctgctaccaaaagtgaacaaaggatctgtggagaatgagatcaaaagtcctcattcaaagat tagaaaaaactgagtggatgttaatgtgaaggacaatgcaggttggactccgctacatgaagcttgtaaccatggccatg tggattgtgtgagagagttgttacaatttgttcctgcaaaaacagtgaaggaatactttggtacagacagtgtgaaggct cacaaggttgatttactggcatgtacagatgagttgatcactcccctacatgatgctgtactcaataacaggactgaggt ctgcagattgctgttacagcatggagggtcctctttgctggagtgtaggacagtgagaggattcacaccattagatctgg cccagacagatgaactacatgaactattatcatcttaccagtccacagatcatgagctgtctttgtcatgttctcaagta acacttaaacttaagtcatttaaaaatggaaatagttttgtgaaatag |
|
Protein
| Protein ID | pfu_aug2.0_4.1_13317.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4.1_13317.t1 MSRISDGESSVQKLRSSMISQILWPGITQPNMNNKCRQLMSLFWDSLCCSAKQGDKVILVKCMTSLVSMVTSICHMTEML PYLSSSESLFTTLVRTNIFIQEMARTINKCEMSPSYLQLVLLCIQSPVICLHVCCTLLAYMDDYLILGEITVNDITLADI VAKYLYLLPKVNKGSVENEIKSPHSKIRKNXVDVNVKDNAGWTPLHEACNHGHVDCVRELLQFVPAKTVKEYFGTDSVKA HKVDLLACTDELITPLHDAVLNNRTEVCRLLLQHGGSSLLECRTVRGFTPLDLAQTDELHELLSSYQSTDHELSLSCSQV TLKLKSFKNGNSFVK |
|