Gene
| Gene Model ID | pfu_aug2.0_4.1_13319 |
|---|---|
| Locus | scaffold4.1 : 214824 ... 231015 : - |
| To GenomeBrowser | scaffold4.1:214824..231015 |
| Genes list of scaffold | scaffold4.1 |
| Synonym | pfu_aug1.0_1271.1_51250 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4.1_13319.t1 | 1 | 1 | BRCT | 19 | 85 | 1.4e-07 | 31.5 | 5.1e-11 | 3.8e-07 | 30.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4.1_13319.t1 | gi|390360060|ref|XP_788169.3| | 6.0e-34 | |
| pfu_aug2.0_4.1_13319.t1 | gi|390349193|ref|XP_003727162.1| | 4.0e-33 | |
| pfu_aug2.0_4.1_13319.t1 | gi|524869286|ref|XP_005091438.1| | PREDICTED: uncharacterized protein LOC101844973 isoform X1 [Aplysia californica] | 2.0e-31 |
| pfu_aug2.0_4.1_13319.t1 | gi|524869294|ref|XP_005091442.1| | PREDICTED: uncharacterized protein LOC101844973 isoform X5 [Aplysia californica] | 2.0e-31 |
| pfu_aug2.0_4.1_13319.t1 | gi|524869290|ref|XP_005091440.1| | PREDICTED: uncharacterized protein LOC101844973 isoform X3 [Aplysia californica] | 2.0e-31 |
Transcript
| Transcript ID | pfu_aug2.0_4.1_13319.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4.1_13319.t1 atggcaagtttaaagactcgcttccaagcaactatagagggagcaggcagtagagtattcctcctatctggtctggaaga tgagaagcgagaagatcttgctgtaaaaatcagagaactaggtggagtgtatgtggaatcagagtctttcagaccacact gtacacatataatttgcggcaaagtaacacggagtgagaagtttttaggaggttgtgcaacaggaagatgggtgctccac cctgagtatgttaccgtctctagtgagaaaggagtatgggaagccgaagaaaattatgaatgggcaaactacgccactcc agataataaacagatggtggactcggccagaagatggagatttcatgctgaggtgtaccagacactagcattcagcgatt ggaaaactgctgtggtggtacctggaaataagaaatctatcacatacaaaaggttattgataagtggtggagctgaggta tataatctgaaacttccagtgaagaatccagggaaagtgatgaaccttctgacatttgtgtttgtgagtgagagactggc tgtacaggtctgtgaccttatggagtatggtatcctgtgtctgagaccagaatacataggggattatcttgtgaaggacc ctgcacctgatcctctggattatctggtgaagccaaaggtctctccgaacacaagtttaagcttagatgtggaaagtagc attttgactggtagtcaagcagatgtaagctatagtcaaggagatataaactgtagtcaaggagacataagctgtagtca aggagacataagctgtagtcaaggagaccagggagatgtaagcagtagtcaggagacaattccttacaccaatgacaaca ttccatcatctgcatacaacaccccagtttcttcaccagccaaggagagcatcaagtcaagtcaaagactgtctaaagaa acagtcatcagccctctagttactggagagcgagttgtagctgtaacaaggcccaggagaaatataactctaacaagctc atttcaagaagggaacaactcagaatctgtacccggcacctcacaaacagggactgtaacaaggagtaacaaaaataagt ctttgaatgataattcttcaaatcacctctccaataactcatcttctattgagattccaagtaaaggaaactcttccctt cagaagacacctgtgaaggagatcaactctaacataacaccgaaagtcttgacaaatacatttcagtataagagctggaa accagcagtatttacaggcagacctttcatatctatgaaaaggaaacatgagcaggattctgatagtgttggtcctgcca agaagctgaaatccaaagatacaagaaatggggaaaagagggtaccacttcctttctctagactattgaccaccatgatt aaccagggtttggatgatgaggatggcagtgaacatttcctacattctggtttggatatgctaatgtccagtctctcaca gaatcagttccctcaagcttcctccctacacataattatgtccatactccagaaggagaagtcacctgtactggtccaga aagcttacaatgttttaatgagggtattactgagtcacccacccacccagtcttccattataggagtgtacatggattcc ttcctgcccagacatacatccatagacaatcagtcagaaagggaacagacttgggattttatcaagtag |
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Protein
| Protein ID | pfu_aug2.0_4.1_13319.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4.1_13319.t1 MASLKTRFQATIEGAGSRVFLLSGLEDEKREDLAVKIRELGGVYVESESFRPHCTHIICGKVTRSEKFLGGCATGRWVLH PEYVTVSSEKGVWEAEENYEWANYATPDNKQMVDSARRWRFHAEVYQTLAFSDWKTAVVVPGNKKSITYKRLLISGGAEV YNLKLPVKNPGKVMNLLTFVFVSERLAVQVCDLMEYGILCLRPEYIGDYLVKDPAPDPLDYLVKPKVSPNTSLSLDVESS ILTGSQADVSYSQGDINCSQGDISCSQGDISCSQGDQGDVSSSQETIPYTNDNIPSSAYNTPVSSPAKESIKSSQRLSKE TVISPLVTGERVVAVTRPRRNITLTSSFQEGNNSESVPGTSQTGTVTRSNKNKSLNDNSSNHLSNNSSSIEIPSKGNSSL QKTPVKEINSNITPKVLTNTFQYKSWKPAVFTGRPFISMKRKHEQDSDSVGPAKKLKSKDTRNGEKRVPLPFSRLLTTMI NQGLDDEDGSEHFLHSGLDMLMSSLSQNQFPQASSLHIIMSILQKEKSPVLVQKAYNVLMRVLLSHPPTQSSIIGVYMDS FLPRHTSIDNQSEREQTWDFIK |
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