Gene
| Gene Model ID | pfu_aug2.0_4.1_13323 |
|---|---|
| Locus | scaffold4.1 : 277427 ... 302285 : - |
| To GenomeBrowser | scaffold4.1:277427..302285 |
| Genes list of scaffold | scaffold4.1 |
| Synonym | pfu_aug1.0_18379.1_47203 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 5 -amp-activated protein kinase catalytic subunit alpha-2 | GO:0004679 GO:0005524 GO:0006468 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4.1_13323.t3 | 1 | 1 | Pkinase | 15 | 254 | 0.0 | 243.1 | 0.0 | 0.0 | 238.4 |
| pfu_aug2.0_4.1_13323.t3 | 2 | 1 | Kinase-like | 15 | 62 | 8.8e-07 | 28.1 | 0.1 | 250.0 | 0.3 |
| pfu_aug2.0_4.1_13323.t3 | 1 | 1 | Pkinase_Tyr | 16 | 225 | 4.6e-39 | 134.0 | 2.7003e-42 | 6.7e-39 | 133.5 |
| pfu_aug2.0_4.1_13323.t3 | 2 | 2 | Kinase-like | 119 | 214 | 8.8e-07 | 28.1 | 2.9e-09 | 7.1e-06 | 25.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4.1_13323.t3 | gi|752882682|ref|XP_011259007.1| | PREDICTED: 5'-AMP-activated protein kinase catalytic subunit alpha-2 [Camponotus floridanus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_4.1_13323.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4.1_13323.t1 atgttacaagtggatccactgaaaagggccaccataaaagatatcagggatcatgaatggtttcagaaagatttaccggt atatctgttcccgtcccccaatgaccaggatgcttccatcgtagacatggaggcaatcagagatgtttgtgataaattcg gtgcatcagagtatgatgtacagagtgccttattgagtgacgacccacatgatcagctcagtattgcgtatcatctgatc ttagacaataaaaggctggcacttgacacatcagataccgagtttcacgagttttatttagcgtccagtccaccggcaga ttccttcatgttggcacggcacgccccacatctgctgggatctccccctccacaggaacaagcctccagtcctctcagac cacacccagagagaatgccaggtataagatctcagagtaagccacaggacatcatgcatgaagttttcagagctatgaaa actttaggctatgagtggaagatcataaacccgtaccacatacgagttaggagaaagaacccactcaccaacaaattttc caagatgagtctacagttgtaccaggttgatcagaagagttttctcctcgactttaagagtctgaaccaagtggatctca gtgactcactcaccaactcagtaaactcggagtcctcagcaagggtggcaggatcctcccctagatcgtcattctcagat ttagatccggcacaggacactgtgttattaatgcctgatgagaagatggatgtagatgaagagacacatcgaccccacca gacgctggaattctttgaaatgtgtgctgatctcatcacgaccctcgccagatag |
|
| Transcript ID | pfu_aug2.0_4.1_13323.t2 |
| Definition | - |
>pfu_aug2.0_4.1_13323.t2 atggcggataagacagggccacaactaaaaatcggtcactatattcttggcgatactctgggtgttggaacatttggaaa agtaaagattgccactcatcagctgacaaatcacaaggtagctgtaaagatcctgaacagacagaaaattaaaagcctgg atgtggttggcaaaataaaacgggaaatccagaatctgaagctcttcagacacccgcatataattaaactttaccaggtg atcagcactcccacagatattttcatggtgatggaatatgtagcagggggagagttatttgactacattgtcaaacatgg aaagctgaaggagccagaagctcgcagatttttccagcaaattatttctggagttgattactgccatagacatatggttg tgcacagagatctaaaaccagaaaacttactcctggatagcgctctcaatgttaaaatagctgactttggactgtctaac atgatgcatgatggagagtttttgaggacaagctgtggttctcctaattatgcagctccagaagtcatttccggaaagtt gtatgccggaccagaagtggatatatggagttgtggtgttattttgtatgctctcctttgtggaacactgccatttgatg atgagcatgtcccaactctgttcagaaagattaaataagtggtcagtttactctgcctcatgttacaagtggatccactg aaaagggccaccataaaagatatcagggatcatgaatggtttcagaaagatttaccggtatatctgttcccgtcccccaa tgaccaggatgcttccatcgtagacatggaggcaatcagagatgtttgtgataaattcggtgcatcagagtatgatgtac agagtgccttattgagtgacgacccacatgatcagctcagtattgcgtatcatctgatcttagacaataaaaggctggca cttgacacatcagataccgagtttcacgagttttatttagcgtccagtccaccggcagattccttcatgttggcacggca cgccccacatctgctgggatctccccctccacaggaacaagcctccagtcctctcagaccacacccagagagaatgccag gtataagatctcagagtaagccacaggacatcatgcatgaagttttcagagctatgaaaactttaggctatgagtggaag atcataaacccgtaccacatacgagttaggagaaagaacccactcaccaacaaattttccaagatgagtctacagttgta ccaggttgatcagaagagttttctcctcgactttaagagtctgaaccaagtggatctcagtgactcactcaccaactcag taaactcggagtcctcagcaagggtggcaggatcctcccctagatcgtcattctcagatttagatccggcacaggacact gtgttattaatgcctgatgagaagatggatgtagatgaagagacacatcgaccccaccagacgctggaattctttgaaat gtgtgctgatctcatcacgaccctcgccagatag |
|
| Transcript ID | pfu_aug2.0_4.1_13323.t3 |
| Definition | - |
>pfu_aug2.0_4.1_13323.t3 atggcggataagacagggccacaactaaaaatcggtcactatattcttggcgatactctgggtgttggaacatttggaaa agtaaagattgccactcatcagctgacaaatcacaaggtagctgtaaagatcctgaacagacagaaaattaaaagcctgg atgtggttggcaaaataaaacgggaaatccagaatctgaagctcttcagacacccgcatataattaaactttaccaggtg atcagcactcccacagatattttcatggtgatggaatatgtagcagggggagagttatttgactacattgtcaaacatgg aaagctgaaggagccagaagctcgcagatttttccagcaaattatttctggagttgattactgccatagacatatggttg tgcacagagatctaaaaccagaaaacttactcctggatagcgctctcaatgttaaaatagctgactttggactgtctaac atgatgcatgatggagagtttttgaggacaagctgtggttctcctaattatgcagctccagaagtcatttccggaaagtt gtatgccggaccagaagtggatatatggagttgtggtgttattttgtatgctctcctttgtggaacactgccatttgatg atgagcatgtcccaactctgttcagaaagattaaataagtggtcagtttactctgcctcatgttacaagtggatccactg aaaagggccaccataaaagatatcagggatcatgaatggtttcagaaagatttaccggtatatctgttcccgtcccccaa tgaccaggatgcttccatcgtagacatggaggcaatcagagatgtttgtgataaattcggtgcatcagagtatgatgtac agagtgccttattgagtgacgacccacatgatcagctcagtattgcgtatcatctgatcttagacaataaaaggctggca cttgacacatcagataccgagtttcacgagttttatttagcgtccagtccaccggcagattccttcatgttggcctccag tcctctcagaccacacccagagagaatgccaggtataagatctcagagtaagccacaggacatcatgcatgaagttttca gagctatgaaaactttaggctatgagtggaagatcataaacccgtaccacatacgagttaggagaaagaacccactcacc aacaaattttccaagatgagtctacagttgtaccaggttgatcagaagagttttctcctcgactttaagagtctgaacca agtggatctcagtgactcactcaccaactcagtaaactcggagtcctcagcaagggtggcaggatcctcccctagatcgt cattctcagatttagatccggcacaggacactgtgttattaatgcctgatgagaagatggatgtagatgaagagacacat cgaccccaccagacgctggaattctttgaaatgtgtgctgatctcatcacgaccctcgccagatag |
|
Protein
| Protein ID | pfu_aug2.0_4.1_13323.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4.1_13323.t1 MLQVDPLKRATIKDIRDHEWFQKDLPVYLFPSPNDQDASIVDMEAIRDVCDKFGASEYDVQSALLSDDPHDQLSIAYHLI LDNKRLALDTSDTEFHEFYLASSPPADSFMLARHAPHLLGSPPPQEQASSPLRPHPERMPGIRSQSKPQDIMHEVFRAMK TLGYEWKIINPYHIRVRRKNPLTNKFSKMSLQLYQVDQKSFLLDFKSLNQVDLSDSLTNSVNSESSARVAGSSPRSSFSD LDPAQDTVLLMPDEKMDVDEETHRPHQTLEFFEMCADLITTLAR |
|
| Protein ID | pfu_aug2.0_4.1_13323.t2 |
| Definition | - |
>pfu_aug2.0_4.1_13323.t2 MADKTGPQLKIGHYILGDTLGVGTFGKVKIATHQLTNHKVAVKILNRQKIKSLDVVGKIKREIQNLKLFRHPHIIKLYQV ISTPTDIFMVMEYVAGGELFDYIVKHGKLKEPEARRFFQQIISGVDYCHRHMVVHRDLKPENLLLDSALNVKIADFGLSN MMHDGEFLRTSCGSPNYAAPEVISGKLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFRKIKXVVSLLCLMLQVDPL KRATIKDIRDHEWFQKDLPVYLFPSPNDQDASIVDMEAIRDVCDKFGASEYDVQSALLSDDPHDQLSIAYHLILDNKRLA LDTSDTEFHEFYLASSPPADSFMLARHAPHLLGSPPPQEQASSPLRPHPERMPGIRSQSKPQDIMHEVFRAMKTLGYEWK IINPYHIRVRRKNPLTNKFSKMSLQLYQVDQKSFLLDFKSLNQVDLSDSLTNSVNSESSARVAGSSPRSSFSDLDPAQDT VLLMPDEKMDVDEETHRPHQTLEFFEMCADLITTLAR |
|
| Protein ID | pfu_aug2.0_4.1_13323.t3 |
| Definition | - |
>pfu_aug2.0_4.1_13323.t3 MADKTGPQLKIGHYILGDTLGVGTFGKVKIATHQLTNHKVAVKILNRQKIKSLDVVGKIKREIQNLKLFRHPHIIKLYQV ISTPTDIFMVMEYVAGGELFDYIVKHGKLKEPEARRFFQQIISGVDYCHRHMVVHRDLKPENLLLDSALNVKIADFGLSN MMHDGEFLRTSCGSPNYAAPEVISGKLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFRKIKXVVSLLCLMLQVDPL KRATIKDIRDHEWFQKDLPVYLFPSPNDQDASIVDMEAIRDVCDKFGASEYDVQSALLSDDPHDQLSIAYHLILDNKRLA LDTSDTEFHEFYLASSPPADSFMLASSPLRPHPERMPGIRSQSKPQDIMHEVFRAMKTLGYEWKIINPYHIRVRRKNPLT NKFSKMSLQLYQVDQKSFLLDFKSLNQVDLSDSLTNSVNSESSARVAGSSPRSSFSDLDPAQDTVLLMPDEKMDVDEETH RPHQTLEFFEMCADLITTLAR |
|