Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_4.1_13325
Locus scaffold4.1 : 340961 ... 347955 : -
To GenomeBrowser scaffold4.1:340961..347955
Genes list of scaffold scaffold4.1
Synonym pfu_aug1.0_1240.1_22502

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_4.1_13325.t1 gi|573911552|ref|XP_006643494.1| PREDICTED: kyphoscoliosis peptidase-like [Lepisosteus oculatus] 3.9937e-43

Transcript
Transcript IDpfu_aug2.0_4.1_13325.t1
Definition-
>pfu_aug2.0_4.1_13325.t1
atggggtccggatcctcgagtcaaaatgggagtgaccctctcctccagagcggggcagataagccaatcagaccgaggaa
taaaagaacaaataaaaaacccaaagtacagaaatctcataaggatattccaaagattactccacccaagtctgaacgtg
acaggtttctggagggcctagacttctcttacgtcgatgaccatgcaatgaacgcaccacacagcttgttgtttgagggg
ttctgggaggttggtgagtaccttacagacgagtgggcatgggaggatgacctggtcaagatgaggtcagtcttcagatg
gatcacctcctacaacgtccgcaaaatgaaaatagaagtgaccccgcccaccgactctgtactggagtatttcagcaaga
tacagtgtgacatcggaaatcatgcaaatttgttctacattctatgccaaatagtagatgtaccatgtgtggtaatagac
ggttttaccaaaagttctgcatacaagattggggagaagctcaacaaacgggccataaaatctcagtggaacgcagttta
tatcaaaggcaactggagactgatcgacgtattctgggcgactacatgcgtggaagtcaataccggggatgaccctctgg
gactccacagaaacgaccataaacttgtaaaattcagggtggaccaaagaactaagcttccacatagagagctagtggat
gaatattatttcttcactgagccagaggattttatatggacacattttcccgacgaggacaggtggcagcttttgccaga
tgagaagaaaatgaaactagaagaatttgaaaaacttgtttacactcgtgagcgattcatggaacttgaattgggattta
cgcacaaagtttacagaagagtaaacgttcccttgaagcaaggaaaaggcatgatagaaatcaaactgcccaaagaaaga
ggcagattcttgaagttcaagtttgctctttaccgaccgcgaggaacgctagctcctgaggagttagaagcagttctaaa
tgagtgcgtgaagatggatcaaggaccagaaattcttcattttgatttcgatttgccagtttgtggctcatttaactttg
aagtttacggcagagatacaaagtcaaatgaacttggtcagtttgatttgtgttgcacgtacgttatccgtagcacggtc
cctgaaaaaaagccactgcccttacccgacaatcccgagattggttggggaccaaacatgaaaactatggtttctggtat
caaacccatcacacacaaacgttcaaaaataatcacggacgacggaaggcttgaaatcaaaatacaagggtcaaaagaca
gcaatttacaaatggagataaaatctgctgtggtagatgacgcttccattactaagtacgccacgttacgttgggaaaac
ggcgaatacataattaacacacgtttgccaaaagctggtcattacatcatgaaaataaacgtgaaacctcccaaaagtca
agaaattgaaaacgtgctcaactacatcatcaaatgtacaggacaatatgaaatggacgaaccatttccaaacattgttg
gtggagtgttgggcccaacacctaaagctgaagagatgggagtccgtgctgttgttaatgaaaatggaatagttgaggca
aaaagaggaaaggcaaaaatagacattgatgcagatgaagacatgaacttgatccatgaacttgactgcaatgatcccgt
gggtgtcgagcatatgactgtgacaaccgcccgtgagggtagaatacagacttatgacctaaacctcccgaaatctggtc
aatattcaatgaacatcttcggtaacagagctaaaggcaaggatgatgtgacacatttctattcgtttctcatcaattcc
acgggaaaaccacccaaaaggaagggaaacaaatccgatcgttcacttgatccgtcagtctattccgttcctgtcatacc
ctcggacaccccaaggtcacagaccaaactgtctgacgtggtcaccaggaccatcaggaccaaggattcagagatattgg
tgccggggccagacgacatgaccaatgtagtggtgtacctggatgaggtcggatcccaggaaggtccttcatcagaacct
tgtcaacacatgcgacgagacggcagcaactggtacacggtaaaactggctaacgtaggcgactatctgcttaatgtgta
tcagagaaatggggaaactatcaagaaccttatgaggtacaaactccggagaatggacatagatgcaatggaggaggaaa
aacaaccgaatagcgactcattgttcaaaatcagagaacaaaagaaaagtaatgctgttgaaaatatgaaaacagcattg
gacttgaagaacatcggacaaatagagaagtcaatcatagaaatcaaatccctttatccgggccagtcacatgaactggt
ggagagagcagagaaaaccatcagagcactggatgtccggaaagaactactgagtgcatatgaacttcggcatcttccaa
ctttggaaaggtctctgacgaaagccagaaacaacaactacgacaaaatattggatccagaaatcctcttggcagagaga
ctacagaaaagactggagactctcaaagctctgaaaaaggaggtcatgatgactgatgtacaggccattactgaactcaa
acgatacaaccagccaccagatggtgtgtaccaaatcatggcgtgtacacttcttctacttggccacccgccatgggaga
tagacacttgggcaaaatgtaaaggcatcattgggaggacaggcagagaatctttgaagttcaaaatggccgattttgat
ccacgagaagtcccgctagaggtcgctctcgatggtaaacagctcattgacccatatacagaaaaacaaataagagatgt
cagtccaactgccgcagctttccacgtgtggaattcaaggcaattaaatgaagtagaatcaactactgggactttgggca
ctaagcatttcgtggcagaggacacgggcgctgatgatgatgatgaccacacttctccacaactgcacttgcagacgata
tcagagggggacagtctgaacgacgaggatcaaaacgtcctacctctcaccaaggaaaatgttgataaactggattcagt
caatgatactggcaataaaacgacaagaagcaacggatacgatagtgacgcaacaaaaagacaactcaaaacaccaatga
gtgatcccatgagacaaacaaggtataattctgtgaaaacaccgggcacggactatagcggatatcagagaaacaagaaa
atgtcgtcaggttctctgccaccattggctccagcaaagaacaatgtggtaaacgggaaatctccggccgtcaaacgacc
gaaaagtttatcaccgaaaagtagtcctgtactgcgaatgaataggtcttatgagtacaggatcaataaaaaagtgggat
tcaatcattacagaaaacttggaatcattcctgattggaaataa

Protein
Protein IDpfu_aug2.0_4.1_13325.t1
Definition-
>pfu_aug2.0_4.1_13325.t1
MGSGSSSQNGSDPLLQSGADKPIRPRNKRTNKKPKVQKSHKDIPKITPPKSERDRFLEGLDFSYVDDHAMNAPHSLLFEG
FWEVGEYLTDEWAWEDDLVKMRSVFRWITSYNVRKMKIEVTPPTDSVLEYFSKIQCDIGNHANLFYILCQIVDVPCVVID
GFTKSSAYKIGEKLNKRAIKSQWNAVYIKGNWRLIDVFWATTCVEVNTGDDPLGLHRNDHKLVKFRVDQRTKLPHRELVD
EYYFFTEPEDFIWTHFPDEDRWQLLPDEKKMKLEEFEKLVYTRERFMELELGFTHKVYRRVNVPLKQGKGMIEIKLPKER
GRFLKFKFALYRPRGTLAPEELEAVLNECVKMDQGPEILHFDFDLPVCGSFNFEVYGRDTKSNELGQFDLCCTYVIRSTV
PEKKPLPLPDNPEIGWGPNMKTMVSGIKPITHKRSKIITDDGRLEIKIQGSKDSNLQMEIKSAVVDDASITKYATLRWEN
GEYIINTRLPKAGHYIMKINVKPPKSQEIENVLNYIIKCTGQYEMDEPFPNIVGGVLGPTPKAEEMGVRAVVNENGIVEA
KRGKAKIDIDADEDMNLIHELDCNDPVGVEHMTVTTAREGRIQTYDLNLPKSGQYSMNIFGNRAKGKDDVTHFYSFLINS
TGKPPKRKGNKSDRSLDPSVYSVPVIPSDTPRSQTKLSDVVTRTIRTKDSEILVPGPDDMTNVVVYLDEVGSQEGPSSEP
CQHMRRDGSNWYTVKLANVGDYLLNVYQRNGETIKNLMRYKLRRMDIDAMEEEKQPNSDSLFKIREQKKSNAVENMKTAL
DLKNIGQIEKSIIEIKSLYPGQSHELVERAEKTIRALDVRKELLSAYELRHLPTLERSLTKARNNNYDKILDPEILLAER
LQKRLETLKALKKEVMMTDVQAITELKRYNQPPDGVYQIMACTLLLLGHPPWEIDTWAKCKGIIGRTGRESLKFKMADFD
PREVPLEVALDGKQLIDPYTEKQIRDVSPTAAAFHVWNSRQLNEVESTTGTLGTKHFVAEDTGADDDDDHTSPQLHLQTI
SEGDSLNDEDQNVLPLTKENVDKLDSVNDTGNKTTRSNGYDSDATKRQLKTPMSDPMRQTRYNSVKTPGTDYSGYQRNKK
MSSGSLPPLAPAKNNVVNGKSPAVKRPKSLSPKSSPVLRMNRSYEYRINKKVGFNHYRKLGIIPDWK

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495