Gene
| Gene Model ID | pfu_aug2.0_4.1_13328 |
|---|---|
| Locus | scaffold4.1 : 386675 ... 392490 : - |
| To GenomeBrowser | scaffold4.1:386675..392490 |
| Genes list of scaffold | scaffold4.1 |
| Synonym | pfu_aug1.0_4936.1_30824 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4.1_13328.t1 | 3 | 1 | Transglut_core | 89 | 187 | 1.8e-06 | 28.1 | 2.9e-09 | 2.1e-05 | 24.6 |
| pfu_aug2.0_4.1_13328.t1 | 3 | 2 | Transglut_core | 217 | 244 | 1.8e-06 | 28.1 | 0.14 | 1000.0 | -0.1 |
| pfu_aug2.0_4.1_13328.t1 | 3 | 3 | Transglut_core | 477 | 503 | 1.8e-06 | 28.1 | 2.0 | 15000.0 | -4.1 |
Transcript
| Transcript ID | pfu_aug2.0_4.1_13328.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4.1_13328.t1 atggggataaatcagtcaaaggacctacattctatttctgattttgacaagcaacatatccccgttgctgtatcagcgag taatggcaaacagaagcagccactccccgaccccgccccggtcacagagtccaaggatgaagtctttgaccttcagatgt acacgtccattgatgagtacgtcctcaacgcgccgtcaaaattattggtcggtacgtttgatgacgtcattaaattcatg acacatgttgactactggaatgacatggcgaaatctcgggcaatcttccgatgggtgacatcaatagatatctacaacct gaaatctacagagacaccgcccaaaaactcccccttggatttcttcattaagatgcagacaagtcagggtggctacgccc atctcatctggggcctctgtcacatgctagggattccatgtgtaatcatcaatggaatgacaaagagtgcagcttacgag atagggtccaaaatcaacagagaaaacatgggagctcaatggaacgcaatttacttgaaaggaggctggaggtttataga cgcattctgggcctctgcttgtgtggttggcaggaaatcaaaggactggaagatggtggactccgaaggtaactatgtag atgaggatgaagaagatgaaggtactacggaacacacagtgaacgaattttatttcatgactgatcccgagaaattcata tggacccactttcctgatgacgttgaatggcaactcatggagaagacgatatcagagagagattttgaggaacatgtgta catacgcgagaggttttactcaatgggaatcaagattgaggacaagaaactgtataaacaaatccttattccaaccggag gggaggtgcacatacagttagggataccgtcagaccggagcaaagactatcagttcaaatacatgatgtaccggaacaaa accgacgaagactttagtaggcgactattgctggacaaatttgttctgatggagcatacaaatacacatttaaaactttc tcttaggttccctctcaagggcaagtacaagctcgatgtgtacggcatggatgagactaaaacgtctgactttgatttga tatgttcctatgtcgttgaatgtacggaacctaagaagaattgtttgcccctccccgacacacccgccatcggctggggc ccgggacaagaaacgcgggaagctggaatccttcctaaatctcatcaaggcgccatcattgttacagaggatggacgagt ggacatcaaacttggcgccaacaaggccgtggaaatacaccagctcctaaagagcatcaacatcgacgaggcaacactca gcaagtacgctgtggtcagagaggagaatggagagcatttcattcatctacgtcttccccaaggaggagagtacgcattg aaggtatatgctaatgatgaagggaaagagggtaatgcagcaaatgttctgaactaccttatccgatgttccaatgaaaa cgttgaaaatactccgtttccaaacattcctgatggcattcttggcaaaaaggttattgcagacgagataggtgtggaag ctcgaatcaaaaagggacgatttaaaacgaaggacggaagaatccgattagagttcgcggcaatgagtcatgtggagata ctcatggaaatacacactcaagacgctgtagcactgaaataccttagagcataccgtcaggccatcgataatagatgggt tttcgatatagacttacctgttaaaggtgaatactcaatcaatgtgttcgcccgcgagaacgagaaaagaatccgtatct acaatgtacactcttatctagtattttctgatggacatgcatacagagaagacaaacggacacctggtacccctcctaaa gtattgtctgaaacggtgtccacatctgagaatgaggtccttatacccgttccgagtggctatgaccgtgtggtagcttg tcttcagcgtcgtcatgccaacgaccctcccgatagtgcgcagattgaggtcatagaacatgacaacaacaaattactac tcaccgacttacccgagttcggcgagtatcttatgaacatttacgaagtcgacgagtacgggatgatgaccaatattgca cggtatggcatgaacaggaagaccactactgaactgttacacgacgatccaagaacgatcatggaacgaattaacgaaga aagggaagatgaagacgaaacagaatctcagacacgagaagccaatgaaacaggtgctactatagacatggtgcgcaagc gcagaagaattttaatgctcaagagaagagcaatggaactaggcgacaaagaggctctcgaacagcttgtcaaggcctat gaggagaccaaaccaccggaagacgatccaacgttggtggcggcaaagaaactccttaacctactgaatgctaaagatga gctttcagcggcgtcgagaacacggcatttggagaaactgaaaaacgctatcaagcgtgccaaggaggccaattacgatg gaatactcaaccttcaaatagtaacagccgaaagactgaaagagaaactagtaaggatagagaagctgagacacaatatc ctcgtcatggaccagagtacggcggccgaactcagaacctatacccatccaccagatggcgtgagacagtccatcatggc tgtccttatgctcctagagtatccaaagagagatgttaaggattggaaggcgtgccagaacattctatcacgaactggaa aggaatcgttgatgcgacgtgtggccatgtttgatcccaagtactgtttcttagatatcgctctaggagccaagaaagtt atagaacctttcagtttagaggaaatcagagacgtcagcaacggggctgctgctttctataattgggcaagtggtatgat aaaggaggtagaatccacaggaggagccagccgtcccatggatgagtggatgagggtgacagaggacgtgcagggagtgg aggaaagggtgtcactaggcccggcttcggccaggagtaggaagatagagagacagtcacagctcggggaggcgcccatg agaatgaacacacaactctccattaacaggacgtatactctgccatcacagaacggtcagagataa |
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Protein
| Protein ID | pfu_aug2.0_4.1_13328.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4.1_13328.t1 MGINQSKDLHSISDFDKQHIPVAVSASNGKQKQPLPDPAPVTESKDEVFDLQMYTSIDEYVLNAPSKLLVGTFDDVIKFM THVDYWNDMAKSRAIFRWVTSIDIYNLKSTETPPKNSPLDFFIKMQTSQGGYAHLIWGLCHMLGIPCVIINGMTKSAAYE IGSKINRENMGAQWNAIYLKGGWRFIDAFWASACVVGRKSKDWKMVDSEGNYVDEDEEDEGTTEHTVNEFYFMTDPEKFI WTHFPDDVEWQLMEKTISERDFEEHVYIRERFYSMGIKIEDKKLYKQILIPTGGEVHIQLGIPSDRSKDYQFKYMMYRNK TDEDFSRRLLLDKFVLMEHTNTHLKLSLRFPLKGKYKLDVYGMDETKTSDFDLICSYVVECTEPKKNCLPLPDTPAIGWG PGQETREAGILPKSHQGAIIVTEDGRVDIKLGANKAVEIHQLLKSINIDEATLSKYAVVREENGEHFIHLRLPQGGEYAL KVYANDEGKEGNAANVLNYLIRCSNENVENTPFPNIPDGILGKKVIADEIGVEARIKKGRFKTKDGRIRLEFAAMSHVEI LMEIHTQDAVALKYLRAYRQAIDNRWVFDIDLPVKGEYSINVFARENEKRIRIYNVHSYLVFSDGHAYREDKRTPGTPPK VLSETVSTSENEVLIPVPSGYDRVVACLQRRHANDPPDSAQIEVIEHDNNKLLLTDLPEFGEYLMNIYEVDEYGMMTNIA RYGMNRKTTTELLHDDPRTIMERINEEREDEDETESQTREANETGATIDMVRKRRRILMLKRRAMELGDKEALEQLVKAY EETKPPEDDPTLVAAKKLLNLLNAKDELSAASRTRHLEKLKNAIKRAKEANYDGILNLQIVTAERLKEKLVRIEKLRHNI LVMDQSTAAELRTYTHPPDGVRQSIMAVLMLLEYPKRDVKDWKACQNILSRTGKESLMRRVAMFDPKYCFLDIALGAKKV IEPFSLEEIRDVSNGAAAFYNWASGMIKEVESTGGASRPMDEWMRVTEDVQGVEERVSLGPASARSRKIERQSQLGEAPM RMNTQLSINRTYTLPSQNGQR |
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