Gene
| Gene Model ID | pfu_aug2.0_4.1_13329 |
|---|---|
| Locus | scaffold4.1 : 397845 ... 399640 : - |
| To GenomeBrowser | scaffold4.1:397845..399640 |
| Genes list of scaffold | scaffold4.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| nanos homolog 2 | GO:0000932 GO:0003729 GO:0005515 GO:0005634 GO:0007283 GO:0017148 GO:0030718 GO:0044838 GO:0045835 GO:0048471 GO:1900153 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4.1_13329.t1 | 1 | 1 | zf-nanos | 97 | 150 | 1.4e-24 | 85.7 | 3.8e-28 | 2.8e-24 | 84.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4.1_13329.t1 | gi|507700654|ref|XP_004644456.1| | PREDICTED: nanos homolog 2 [Octodon degus] | 7.0e-22 |
| pfu_aug2.0_4.1_13329.t1 | gi|532055190|ref|XP_005370311.1| | PREDICTED: nanos homolog 2 [Microtus ochrogaster] | 8.0e-22 |
| pfu_aug2.0_4.1_13329.t1 | gi|674085060|ref|XP_008850293.1| | PREDICTED: nanos homolog 2 [Nannospalax galili] | 2.0e-21 |
| pfu_aug2.0_4.1_13329.t1 | gi|731289546|ref|XP_010612873.1| | PREDICTED: nanos homolog 2 [Fukomys damarensis] | 3.0e-21 |
Transcript
| Transcript ID | pfu_aug2.0_4.1_13329.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4.1_13329.t1 atgagctttttcaaaccgtttgagccagaaaaagaagaattagcacgagagagaaaggcgagatcaagaggcagcggtcc tcaacatagttatgaacttttcagggttccattaaatagccaatgttccaggacagatcagcaagcaggaggagaagacg ctgtggaaaaactatgccaactcatgacacagcccgtgggaggaggctctgagctgttcgttagtgaccggagggaagaa gaaaaattgccatatcgccaaagtccgtatatgaagaaagaaccgatatgtaacttctgtaaacgtaacggagagacgga agcattttactcatcgcatttcctgaaaggaccaggagggaaggtgacgtgccctgttctcagaaagtacaagtgtccga tgtgtggtgccaccggagagcacgcccatacaatcaagtactgcccgtacaatactgagaggtactcaacagtgatgaca gacagaacgcaaaggaaaagttgtggatgtaaaattcatcactcgtgtactaacagaactcactga |
|
Protein
| Protein ID | pfu_aug2.0_4.1_13329.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4.1_13329.t1 MSFFKPFEPEKEELARERKARSRGSGPQHSYELFRVPLNSQCSRTDQQAGGEDAVEKLCQLMTQPVGGGSELFVSDRREE EKLPYRQSPYMKKEPICNFCKRNGETEAFYSSHFLKGPGGKVTCPVLRKYKCPMCGATGEHAHTIKYCPYNTERYSTVMT DRTQRKSCGCKIHHSCTNRTH |
|