Gene
| Gene Model ID | pfu_aug2.0_4.1_13330 |
|---|---|
| Locus | scaffold4.1 : 402168 ... 418150 : - |
| To GenomeBrowser | scaffold4.1:402168..418150 |
| Genes list of scaffold | scaffold4.1 |
| Synonym | pfu_aug1.0_23467.1_69563 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4.1_13330.t1 | 3 | 1 | Transglut_core | 103 | 203 | 2.6e-06 | 27.5 | 6.0e-10 | 8.9e-06 | 25.8 |
| pfu_aug2.0_4.1_13330.t1 | 3 | 2 | Transglut_core | 235 | 259 | 2.6e-06 | 27.5 | 0.27 | 3900.0 | -2.0 |
| pfu_aug2.0_4.1_13330.t1 | 3 | 3 | Transglut_core | 859 | 880 | 2.6e-06 | 27.5 | 0.4 | 5900.0 | -2.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4.1_13330.t1 | gi|675866040|ref|XP_009018580.1| | hypothetical protein HELRODRAFT_192035 [Helobdella robusta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_4.1_13330.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4.1_13330.t1 atgggttctggatctagtacagcacagaccgagcgacgaccggtcacggcgccaaatgtaggcaaacatacaaaaagcgc aactgctgaagcgcacggaaaccacgcccatcacaatgatgtgaccaatcagcgtgatggtaacaatcacactgatgacg gtcacacagcaccggctgagtcggcttcacctgcaccgacaaagtctgcacaaactccacctaaatcagccgcttctgcg ccacccaaattactgatgggttcattcaaagatcttatcaagtacctgacagaggacgagacttgggacgatactgccaa ggcgcgcgcgatattccggtgggtgacgtcaatcgatgtgtacagccttaaggtagagtccagtcctccctctcattccc cactggaatactttcttaagattcagaataaccaaggaaaccacgcccatctcctgtcaggattatgtcagatggcgggt ttaccatgcgtcattattagtggcatgaataagagcgccgcgtatgaaataggaagtaaatgtgaccggaagagcatggg cgcccagtggaacgccgtctacattcaggatgattggcgcttcattgacgccttttgggcgtcagcatgcgtcgttggta agaaatcaagcgaatggacacttgtagacagtgatggaaacgtgacacaagaggaacaggacgatgatgctgagggggaa acgcaacacagaattaacgaattttacttcctccccgacccagacaaactgatctggacacattatccagacgagaccga ctggcagttattaaaaaagactattccaatgaaggattttgaaaatcacgtctacgttcgagaacgcttctactacttgg ggatggagtttaccccaaaaagtgaaacgaaatgcgctctaaatgccaaggatggtgagatttcccttcctttcgcattg cccgatgatcgcagtgagcactttcggttcaaatacatgctgtacaaaaataaaggatcaggaggagatgatgatattgg taaagatgtacttctggatcgcttcgttctattcgaacacactgcagatcacttgcgattcgcgatccgttttcctattg ccgggaaatttaaaatggatgtgtttgggttagacgtgcgagagtccgatatatttgacttaacgtgtacctaccttatt aactgttcgtcccctcagaagaattgcttgccactacccgactgtccgccaataggatggggttttggtggcgacgccaa ggcagccggacttgaggctaaatctcatgatggcgcaattattctctcaaaagacggaaaggttgaaattaaacttggtg cacacagagacatccgtctacatcagctgctgaagaacacaatagttgacgaggccaccctcagtaaatacgcagttatc agagaggaaaatggcgattacatagtggacatccggctgcctcaaggcggcgaatacgcactgaagttgtacgcaaacga tgaaaaagaggaaggcgatgccgacaatgtcctcaactatttgataaaatgccaagataagaatgttacaaacaacccat tccctaacgtcactgatggaatgctgggcaaaaaatctattgctgatcaccttggtgtcaaggctttgtcacatccgggc cctaaaatagacgctaaagacggtaaatgtagactggaattctctgcaaagcccgacacagatttagtgtgcgagttaca cagtaatgaccccaatgcaaccaagaaaatgaaggtgactccaacagagaagaacggtaaatgggtctttgatattgata tgccagtagaaggagaatattctgtaaatgtctttgcccagaagaaagacagcaagcgaatctacaacgttcattcctac ctgattcagtcaggtggccatccagaagaggggactggggacgatagtaatggtgatgacaacaatgaacctatcaaagt ggtgacggagacagtacaaacatccgagagggaagtgttaatcccgtgtcccagtggccacgaaaatgttgtggcctgtg tacatcgtcgtcatgccaacgacccacctgatgcccaagatctggaatacatagaacaggatggcatgaagatcttcaag tcaactttcgatgaatatggcgaatacatggttgatttgtaccggaaagatgaaaatggagtcctcaaaaacattgcgcg gtatcaacnagtggtgacggagacagtacaaacatccgagagggaagtgttaatcccgtgtcccagtggccacgaaaatg ttgtggcctgtgtacatcgtcgtcatgccaacgacccacctgatgcccaagatctggaatacatagaacaggatggcatg aagatcttcaagtcaactttcgatgaatatggcgaatacatggttgatttgtaccggaaagatgaaaatggagtcctcaa aaacattgcgcggtatcaagtaaacaggaaacccgcttctgagttgtatcaagacgatgcacgcttattgatggacaaac tacaagaagatatggagaaaaaacaacaggaagaaatggcgaagatagaaaatgaaagtaaagagaaggcagagtatctg cgagcaatacaaagggcaatggacctgaaagacgcggatatgctggagagtgctatcaaggcttatgtggactctggtaa ttccacaccagacgacaaattcttgcagaaggcgaaaaaacttctggaacttcttagagcaaaagatgcccgagacgcca aggctctggctaaggctatagagcgagctagagctgcaaattatgacaacttgctggatctgcagatagtcatggctggt cgtctgcgagaccagttggagagaattgagcgacttcgtcactctatccttaatttggacagtagaacagtatccgaact caaatcctacaagactcccaaagttgaaatacatcagtcaatgagggcagcatttactttgctaggattctcccagaagg aaacacaggaatgggcctcagttcctgctattttgggtaaaacaggcaaggaatctataatgcgaaagattcgtgaattt gagcctactgcatgttacttagatgtggctctggctgccaaggccttcattgaaccgtataacttggagcaggtccgtga taacagcgctggtgctgccaccttctacgtatgggccaaaggtatgattgaggaagtggagtcgacaggtggcgccaaac gtgatgaaggtgtaggaggaggcgggggcggatctaagaaaaagccaaagaaagcgcaaccaaaaagtgctgccaagaag agaaagaagtaa |
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Protein
| Protein ID | pfu_aug2.0_4.1_13330.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4.1_13330.t1 MGSGSSTAQTERRPVTAPNVGKHTKSATAEAHGNHAHHNDVTNQRDGNNHTDDGHTAPAESASPAPTKSAQTPPKSAASA PPKLLMGSFKDLIKYLTEDETWDDTAKARAIFRWVTSIDVYSLKVESSPPSHSPLEYFLKIQNNQGNHAHLLSGLCQMAG LPCVIISGMNKSAAYEIGSKCDRKSMGAQWNAVYIQDDWRFIDAFWASACVVGKKSSEWTLVDSDGNVTQEEQDDDAEGE TQHRINEFYFLPDPDKLIWTHYPDETDWQLLKKTIPMKDFENHVYVRERFYYLGMEFTPKSETKCALNAKDGEISLPFAL PDDRSEHFRFKYMLYKNKGSGGDDDIGKDVLLDRFVLFEHTADHLRFAIRFPIAGKFKMDVFGLDVRESDIFDLTCTYLI NCSSPQKNCLPLPDCPPIGWGFGGDAKAAGLEAKSHDGAIILSKDGKVEIKLGAHRDIRLHQLLKNTIVDEATLSKYAVI REENGDYIVDIRLPQGGEYALKLYANDEKEEGDADNVLNYLIKCQDKNVTNNPFPNVTDGMLGKKSIADHLGVKALSHPG PKIDAKDGKCRLEFSAKPDTDLVCELHSNDPNATKKMKVTPTEKNGKWVFDIDMPVEGEYSVNVFAQKKDSKRIYNVHSY LIQSGGHPEEGTGDDSNGDDNNEPIKVVTETVQTSEREVLIPCPSGHENVVACVHRRHANDPPDAQDLEYIEQDGMKIFK STFDEYGEYMVDLYRKDENGVLKNIARYQXVVTETVQTSEREVLIPCPSGHENVVACVHRRHANDPPDAQDLEYIEQDGM KIFKSTFDEYGEYMVDLYRKDENGVLKNIARYQVNRKPASELYQDDARLLMDKLQEDMEKKQQEEMAKIENESKEKAEYL RAIQRAMDLKDADMLESAIKAYVDSGNSTPDDKFLQKAKKLLELLRAKDARDAKALAKAIERARAANYDNLLDLQIVMAG RLRDQLERIERLRHSILNLDSRTVSELKSYKTPKVEIHQSMRAAFTLLGFSQKETQEWASVPAILGKTGKESIMRKIREF EPTACYLDVALAAKAFIEPYNLEQVRDNSAGAATFYVWAKGMIEEVESTGGAKRDEGVGGGGGGSKKKPKKAQPKSAAKK RKK |
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