Gene
| Gene Model ID | pfu_aug2.0_4.1_13331 |
|---|---|
| Locus | scaffold4.1 : 425321 ... 428577 : + |
| To GenomeBrowser | scaffold4.1:425321..428577 |
| Genes list of scaffold | scaffold4.1 |
| Synonym | pfu_aug1.0_4936.1_30826 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| mpv17-like protein 2-like | GO:0005743 GO:0005762 GO:0061668 GO:0070131 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4.1_13331.t1 | 1 | 1 | Mpv17_PMP22 | 101 | 149 | 2.0e-19 | 68.9 | 4.2e-23 | 3.1e-19 | 68.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4.1_13331.t1 | gi|524891357|ref|XP_005102213.1| | PREDICTED: mpv17-like protein 2-like isoform X1 [Aplysia californica] | 3.0e-39 |
| pfu_aug2.0_4.1_13331.t1 | gi|524891359|ref|XP_005102214.1| | PREDICTED: mpv17-like protein 2-like isoform X2 [Aplysia californica] | 5.0e-39 |
| pfu_aug2.0_4.1_13331.t1 | gi|556968473|ref|XP_005993212.1| | PREDICTED: mpv17-like protein 2-like [Latimeria chalumnae] | 5.0e-36 |
| pfu_aug2.0_4.1_13331.t1 | gi|676438622|ref|XP_009048589.1| | hypothetical protein LOTGIDRAFT_112617 [Lottia gigantea] | 2.0e-35 |
| pfu_aug2.0_4.1_13331.t1 | gi|597742208|ref|XP_007233216.1| | PREDICTED: mpv17-like protein 2-like [Astyanax mexicanus] | 5.0e-35 |
Transcript
| Transcript ID | pfu_aug2.0_4.1_13331.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4.1_13331.t1 atgtcctctgtactgaaggctctcttctccaagcacctactgttgaccaacacgctgaccagcggtaccctcctagccct cggtgacgtcatcacacagaaactggagagggagtacaggacaagggaaggggaccataatgaatccacgtgggaccggt ggagaacgggtagaatgttctcaatcggaattctcattggtccgttcggtcacatgtggtatgcaaaactagcagatcga ttggtcaagggacaaggaccgaaagttgtgttgaagaaaatagccgtggaccaaataatgttcacacctgttatcacggt agattgttgcgtatggccaccagctcagtacatcaactttcattttataccagccagattccgtcttgtctacgtatcta ctctcacactgtgttggaacacatttctgtcttatatgaaacataggaacccagaagccataccatcatcacagtccctt actctttctgaggcaaaagatgtttga |
|
Protein
| Protein ID | pfu_aug2.0_4.1_13331.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4.1_13331.t1 MSSVLKALFSKHLLLTNTLTSGTLLALGDVITQKLEREYRTREGDHNESTWDRWRTGRMFSIGILIGPFGHMWYAKLADR LVKGQGPKVVLKKIAVDQIMFTPVITVDCCVWPPAQYINFHFIPARFRLVYVSTLTLCWNTFLSYMKHRNPEAIPSSQSL TLSEAKDV |
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