Gene
| Gene Model ID | pfu_aug2.0_4.1_13333 |
|---|---|
| Locus | scaffold4.1 : 436211 ... 450621 : + |
| To GenomeBrowser | scaffold4.1:436211..450621 |
| Genes list of scaffold | scaffold4.1 |
| Synonym | pfu_aug1.0_30432.1_69963 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| pumilio domain-containing protein kiaa0020 homolog | GO:0003723 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4.1_13333.t1 | 2 | 1 | CPL | 295 | 321 | 0.0 | 166.4 | 0.3 | 4400.0 | -2.7 |
| pfu_aug2.0_4.1_13333.t1 | 2 | 2 | CPL | 582 | 727 | 0.0 | 166.4 | 0.0 | 0.0 | 164.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4.1_13333.t1 | gi|524914814|ref|XP_005112217.1| | PREDICTED: pumilio domain-containing protein KIAA0020-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_4.1_13333.t1 | gi|676436312|ref|XP_009047841.1| | hypothetical protein LOTGIDRAFT_111730, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_4.1_13333.t1 | gi|390349728|ref|XP_001197420.2| | PREDICTED: pumilio domain-containing protein KIAA0020 homolog [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_4.1_13333.t1 | gi|390368245|ref|XP_788454.2| | PREDICTED: pumilio domain-containing protein KIAA0020 homolog [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_4.1_13333.t1 | gi|675887584|ref|XP_009029294.1| | hypothetical protein HELRODRAFT_108234 [Helobdella robusta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_4.1_13333.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4.1_13333.t1 atggaagactcatcctttgaagagagtgcacctagagaaagaagaaaaccacctcgaagtaaaaagaaagacactagggg aaatcctgagggtgatagtgtactgcaaaaggacacagttaaattgaaagcaccccctaacagtgataatgattcatcat ttgaagtaacatctccccgcaaaaggaagaaaaataagaatgagcgagataatctagtgtatattgaacaaaaacacatg gcaaagaaatctaaatcaatgtatagtgacactgacttgtcctcattggacgtgacagacaccccagacacactgagcca gatcagtgccatagcgccagtgtctgatgcatctatgatgactactttctctcgaatgagaaacccaaaaggtcgtcatg atgttacatgggagagagcagtgcagaaggctcgcggccagccagatggtgccgagaggtcgttcagcaggaagaaaagc agtaaagtatcgatgaggtcacagattgaagtaattagagaagtagcagagggaggggaatcagacaagtctacggaaaa cgtcccacctaccggcaatactgacgagtcaccagaaccaaagttagaaaggagaaagtccataaaggtcaaaattcaaa gagcagctagtaatgcagctggaaaattaaaaactctcaaaacaaagaagcatttaaatgagagtagaacaggattagga gcgaacaaacgtagattagacgaaagccaactggaagagaagtcagattcaaaaaagacaaagcttaaagaattgccttt caaagagaggaagaaagtcagaaagatgcttaaaaataactttgatatgattcaaagatccaagaaaatatgggaggatc tcagaaaacatgatctaccagacaagtcacgatttgagatgtgccaggagttaatgcagatggtcaagggaaatatgaaa gagtttgcctttgcccatgatacagccagagtactacagtgtttgatacagtatggctccatggaccagagagaggaggt ctatcaggaagttaaagatcagatctgcttgatggcaaaatcaagatatgccaagttccttgtcaaaaagtttctcattt acgggtcaaagaatcacaaaaataatgtgatcaagagtttccatgggaatgttagaaaactagtcagacataaggaagct gctgatgtgatagagttagcttacagtgactatgccaatgctgtacaaaggttatcactactggaggagttctacggacc aagctttactctatttaagaccccagatgtaaagtctttagatcagctgttagagatgcagccagataagaaggacatga tcctcagtaatatgaaggaagctctcttacctctcattgacaagacaatactttcacattcaatggtgcacagacttttt catgagttctttgcccatgcttcagagaaacaaagatctgatatgatagaagctatcagggaaagtgttgtccagataat acacaccagggacggggctcgagcaaccatgtattgtttgtggtacggtacggccaaggacagaaagataataataaaga gtttgaaggggaatgtggtgaaggtgtgtatggacgagtacggacatctggccttgttagctctgtttgatgtggtggac gataccaagatagtacagaaagtcgtactggaggagatactgaagtcattacatgatgtagcccagaatcagtatggtag aaaggtgatgttatatttgatgtacccacgtgaccctcatcacttccaccctgatatagtcagggtactacaggaggggg acaggaatcctaatagtaagaaggacaaatctgttcgtcaccaggaattattggagtttgtatcaccatctttcctacag tttatagtagaccataccagggagttagtaatggagaatgcttctctagtacttataatggccattatctcacatgccaa aggtgatcccacagcagccatggaagcagtggctagaattgccgctgagccatttgtggctggaagtctggagaatcagc atattgtagaacattctgcgggtcacatgaccttaaaacggctgatacaaaatgatagggacagaatccaacaaggttac tctgtcctgttttcacaagtattactgaagacattaaaagaaggatcactgaagtcctgggcagcttgtaacagaggttg tttcactctattatttttacttgaagttgatcatccagacatcacagactcagtaatttcccagttgtcaggcatcagga aatctctcaagaaaatgacattcaagggagctcagatcttactacaaaaactagactcgcttagtggggaatacaaatta taa |
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Protein
| Protein ID | pfu_aug2.0_4.1_13333.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4.1_13333.t1 MEDSSFEESAPRERRKPPRSKKKDTRGNPEGDSVLQKDTVKLKAPPNSDNDSSFEVTSPRKRKKNKNERDNLVYIEQKHM AKKSKSMYSDTDLSSLDVTDTPDTLSQISAIAPVSDASMMTTFSRMRNPKGRHDVTWERAVQKARGQPDGAERSFSRKKS SKVSMRSQIEVIREVAEGGESDKSTENVPPTGNTDESPEPKLERRKSIKVKIQRAASNAAGKLKTLKTKKHLNESRTGLG ANKRRLDESQLEEKSDSKKTKLKELPFKERKKVRKMLKNNFDMIQRSKKIWEDLRKHDLPDKSRFEMCQELMQMVKGNMK EFAFAHDTARVLQCLIQYGSMDQREEVYQEVKDQICLMAKSRYAKFLVKKFLIYGSKNHKNNVIKSFHGNVRKLVRHKEA ADVIELAYSDYANAVQRLSLLEEFYGPSFTLFKTPDVKSLDQLLEMQPDKKDMILSNMKEALLPLIDKTILSHSMVHRLF HEFFAHASEKQRSDMIEAIRESVVQIIHTRDGARATMYCLWYGTAKDRKIIIKSLKGNVVKVCMDEYGHLALLALFDVVD DTKIVQKVVLEEILKSLHDVAQNQYGRKVMLYLMYPRDPHHFHPDIVRVLQEGDRNPNSKKDKSVRHQELLEFVSPSFLQ FIVDHTRELVMENASLVLIMAIISHAKGDPTAAMEAVARIAAEPFVAGSLENQHIVEHSAGHMTLKRLIQNDRDRIQQGY SVLFSQVLLKTLKEGSLKSWAACNRGCFTLLFLLEVDHPDITDSVISQLSGIRKSLKKMTFKGAQILLQKLDSLSGEYKL |
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