Gene
| Gene Model ID | pfu_aug2.0_4.1_13339 |
|---|---|
| Locus | scaffold4.1 : 547661 ... 560631 : + |
| To GenomeBrowser | scaffold4.1:547661..560631 |
| Genes list of scaffold | scaffold4.1 |
| Synonym | pfu_aug1.0_2963.1_59074 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4.1_13339.t1 | 13 | 1 | zf-H2C2_5 | 197 | 214 | 3.4e-06 | 26.9 | 0.00032 | 2.4 | 8.5 |
| pfu_aug2.0_4.1_13339.t1 | 13 | 2 | zf-H2C2_5 | 219 | 242 | 3.4e-06 | 26.9 | 0.00024 | 1.8 | 8.9 |
| pfu_aug2.0_4.1_13339.t1 | 13 | 3 | zf-H2C2_5 | 253 | 260 | 3.4e-06 | 26.9 | 0.55 | 4100.0 | -1.7 |
| pfu_aug2.0_4.1_13339.t1 | 13 | 4 | zf-H2C2_5 | 368 | 390 | 3.4e-06 | 26.9 | 6.6e-05 | 0.49 | 10.7 |
| pfu_aug2.0_4.1_13339.t1 | 13 | 5 | zf-H2C2_5 | 485 | 508 | 3.4e-06 | 26.9 | 1.2e-06 | 0.0091 | 16.1 |
| pfu_aug2.0_4.1_13339.t1 | 13 | 6 | zf-H2C2_5 | 536 | 544 | 3.4e-06 | 26.9 | 0.27 | 2000.0 | -0.7 |
| pfu_aug2.0_4.1_13339.t1 | 13 | 7 | zf-H2C2_5 | 603 | 626 | 3.4e-06 | 26.9 | 3.7e-06 | 0.027 | 14.6 |
| pfu_aug2.0_4.1_13339.t1 | 13 | 8 | zf-H2C2_5 | 648 | 671 | 3.4e-06 | 26.9 | 6.1e-05 | 0.45 | 10.8 |
| pfu_aug2.0_4.1_13339.t1 | 13 | 9 | zf-H2C2_5 | 793 | 817 | 3.4e-06 | 26.9 | 0.014 | 110.0 | 3.3 |
| pfu_aug2.0_4.1_13339.t1 | 13 | 10 | zf-H2C2_5 | 849 | 863 | 3.4e-06 | 26.9 | 0.59 | 4400.0 | -1.8 |
| pfu_aug2.0_4.1_13339.t1 | 13 | 11 | zf-H2C2_5 | 911 | 935 | 3.4e-06 | 26.9 | 0.32 | 2400.0 | -0.9 |
| pfu_aug2.0_4.1_13339.t1 | 13 | 12 | zf-H2C2_5 | 958 | 982 | 3.4e-06 | 26.9 | 0.014 | 100.0 | 3.4 |
| pfu_aug2.0_4.1_13339.t1 | 13 | 13 | zf-H2C2_5 | 987 | 1008 | 3.4e-06 | 26.9 | 5.5e-05 | 0.41 | 10.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4.1_13339.t1 | gi|524913803|ref|XP_005111726.1| | PREDICTED: uncharacterized protein LOC101853047 isoform X1 [Aplysia californica] | 1.0e-29 |
| pfu_aug2.0_4.1_13339.t1 | gi|524913807|ref|XP_005111728.1| | PREDICTED: uncharacterized protein LOC101853047 isoform X3 [Aplysia californica] | 1.0e-29 |
| pfu_aug2.0_4.1_13339.t1 | gi|676465355|ref|XP_009057217.1| | hypothetical protein LOTGIDRAFT_239592 [Lottia gigantea] | 3.0e-28 |
| pfu_aug2.0_4.1_13339.t1 | gi|676477462|ref|XP_009061120.1| | hypothetical protein LOTGIDRAFT_165827 [Lottia gigantea] | 4.0e-15 |
| pfu_aug2.0_4.1_13339.t1 | gi|676454332|ref|XP_009053646.1| | hypothetical protein LOTGIDRAFT_160351 [Lottia gigantea] | 3.0e-10 |
Transcript
| Transcript ID | pfu_aug2.0_4.1_13339.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4.1_13339.t1 atgtcaaaccttcgtatagagagtgtgtccagcctgagccaagacgaggtacaggtcaagacagaaccagaggatcctgg gtatgatgaggcttacagccagagtccggtatctacagtatctaccgtgtctgccgacaccaatggtcattctacaccac aaaacaaccaaaacatacggtccatactcaacaatatgctggatcagaacaaggagcttaccgtaaagtcagttatagac gacctgctacagagaaataacacgttactggagcaagtcgatgccagcatctacaaacctcaacccagaaacacgtcaag taagaaatatgatgacatcatcagaaataagtatggggataatacagtgaggagtaacattctacgtcctggtagtccca ccaaggcctgtaccatacccaagagggatctacctcagatgacaaacagtgtgatagtattaaatgctttggagacatgc tctggggagagtaatattcctaaagagtatgtatgtggagtgtcatctaaagcttatgtcatgacaagtgagggcgtcaa catgcagtctgaccttcagttctattggtgcaacttttgtacgtttaagacagagtcgaaggaagtactcgttcagcatg tgatagagcataggttccactgtaaatactgttcctaccagtccttctcacgtgctgatgttataagacactctaaccaa gatcatgatgaattcaaagacgtggcaaggtcactcaagttctgcacattcacctcagattacaatgatgctgaaagcaa gaaaaggaagctagaagctgaagccaaaaaacaacctccgccaaagaaattcaaaagtgctgctcagaaagaaaaggaaa aagcagaaaagaagaagagatctgaaaatgccaagaaaaattcttcaaaaataatgatgatggctcagccggtagagcag agtttgcccacagtgacgtacaatccacctggtgccaacaagacaacggagcagggaaagcagactgctgggaatgtgac gtctacatctacgacaaagtctggtagtactgtgactgtctcatctggtctgtgctggaactgtggttactgtgactttg ttacacttagtcaaacattcctcaaaactcacctcaataccaggcatacaggcaaagctcacaagtatgtagccatgttg gtgtcttctcaggatgaaatgaacaagatcaaggagcgagatgctatggtgtattccactcctagtaccgtagtggttgg gggtcctaaccgtgcttcggtacaaactcctcctaccccaacacctcctgctcctaaggagaacaaggagcagaagccag agagcccaaaacctgataacacctcacaggcggaggaatcagatgatgaggagtacattcccgaagaagagaaaaagaag tatcctctcacttataaatgtgctcattgtaacttcaatgctcctgtctgttttaagatcaaggaacatttactgatgaa gcacttaggatgtgttttgtatgctttagatatgcgggccataaaactgaagcaaaggagatacgtattcttctgtcata ggaagaactgttcctttacaaccaaaaagacagatgaatatcttagccatagtgacagctgtactccatggcttgtggag aactgtccagaacaggttgatcctcagaccaggaaatgtctggaaatgactcgctccttctcctccaagatctcacagaa agctttccagatggcaaagaacttcaagtcaaataaggtagctgaatatgcctgtctgtattgtagctattctaccaata acaacaccaggctgaagaagcatgtactgtccaaccacagggagtttgctacagttatgaaagatattcatgcacattct atgggtaaaaagacgatggtatatttctgtaagcattgcctatgggaatcacggcaggaaactgaattagaggaacattt gcattcaaaacatgatgattttacgtatgttaactcaaacataggagaaacaaccgcacagaagaataggagccaagagc ccaagaagcacaatgagacaatcagtgcgcatcctccaagtagtacggaggtgagaagacgatctggctcaccacaatgg gaatctggaaactctgataatgtggaggaaaatgaagaagaggaggaggaaatacaaccagaagatctggaggtgagtga ggaagaggtacagaggatgatggatgaatatgtcaaggacgaggcctcacacggaaggtctcctggtcgacctatgagga aggcctcagccgaggcatctgtcagggtcagagctcaaggtcaccagccacccatgtacaggtgtatgcactgttatcac atgtgctttggagtgaacctaatgaggaaacacatctttaccaggcatcccaaggaacctctgagagctatagatgtcaa gaagatgatgggtcgtcagtttgcttactactgcttctgtcctaaggcactctgtaaaacggtgaatagctccgagcagg cattgattaaccatgccatgcaggaacatggattgtctgatgagaatgaccatctgaaggctctactgatgccgttctct ccacataccagcacaccggcaccaccacctgttgaacgtgtcaaaacagaggagccagagaacatggagtatgaacctag caccgttggttatgaatgcttgttttgtagcacgtctacaagtgacacagttcatggaatgaaggtacatgtaaaggaat atcaccccagtgaggaaatcatcttcagagactgtgctgccagaaaactgaagaagtcgtcaagaatcttcatgtgtgag gtggacaattgtgacatattttattctgagcagaaggaatttgagcttcataagctggctcatcagaatgcacacatata cgagtgtaccgtctgtcagtggtttactgctacaccagactccatctccgatcacatgctggcgcttcataaagggggag ccgccacaatcgagatccagcttcttcttgacagtgatggacaggtcatcaagcgggtcagtggcaccaaaatcaaacag gaaccgctataa |
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Protein
| Protein ID | pfu_aug2.0_4.1_13339.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4.1_13339.t1 MSNLRIESVSSLSQDEVQVKTEPEDPGYDEAYSQSPVSTVSTVSADTNGHSTPQNNQNIRSILNNMLDQNKELTVKSVID DLLQRNNTLLEQVDASIYKPQPRNTSSKKYDDIIRNKYGDNTVRSNILRPGSPTKACTIPKRDLPQMTNSVIVLNALETC SGESNIPKEYVCGVSSKAYVMTSEGVNMQSDLQFYWCNFCTFKTESKEVLVQHVIEHRFHCKYCSYQSFSRADVIRHSNQ DHDEFKDVARSLKFCTFTSDYNDAESKKRKLEAEAKKQPPPKKFKSAAQKEKEKAEKKKRSENAKKNSSKIMMMAQPVEQ SLPTVTYNPPGANKTTEQGKQTAGNVTSTSTTKSGSTVTVSSGLCWNCGYCDFVTLSQTFLKTHLNTRHTGKAHKYVAML VSSQDEMNKIKERDAMVYSTPSTVVVGGPNRASVQTPPTPTPPAPKENKEQKPESPKPDNTSQAEESDDEEYIPEEEKKK YPLTYKCAHCNFNAPVCFKIKEHLLMKHLGCVLYALDMRAIKLKQRRYVFFCHRKNCSFTTKKTDEYLSHSDSCTPWLVE NCPEQVDPQTRKCLEMTRSFSSKISQKAFQMAKNFKSNKVAEYACLYCSYSTNNNTRLKKHVLSNHREFATVMKDIHAHS MGKKTMVYFCKHCLWESRQETELEEHLHSKHDDFTYVNSNIGETTAQKNRSQEPKKHNETISAHPPSSTEVRRRSGSPQW ESGNSDNVEENEEEEEEIQPEDLEVSEEEVQRMMDEYVKDEASHGRSPGRPMRKASAEASVRVRAQGHQPPMYRCMHCYH MCFGVNLMRKHIFTRHPKEPLRAIDVKKMMGRQFAYYCFCPKALCKTVNSSEQALINHAMQEHGLSDENDHLKALLMPFS PHTSTPAPPPVERVKTEEPENMEYEPSTVGYECLFCSTSTSDTVHGMKVHVKEYHPSEEIIFRDCAARKLKKSSRIFMCE VDNCDIFYSEQKEFELHKLAHQNAHIYECTVCQWFTATPDSISDHMLALHKGGAATIEIQLLLDSDGQVIKRVSGTKIKQ EPL |
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