Gene
| Gene Model ID | pfu_aug2.0_4.1_13345 |
|---|---|
| Locus | scaffold4.1 : 662431 ... 691380 : + |
| To GenomeBrowser | scaffold4.1:662431..691380 |
| Genes list of scaffold | scaffold4.1 |
| Synonym | pfu_aug1.0_4680.1_30767 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4.1_13345.t1 | 1 | 1 | HECT | 545 | 698 | 2.2e-07 | 30.3 | 4.7e-10 | 7.0e-06 | 25.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4.1_13345.t1 | gi|528512350|ref|XP_005160937.1| | PREDICTED: uncharacterized protein LOC101885443 [Danio rerio] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_4.1_13345.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4.1_13345.t1 atgtgggttcagattgaggcgaaaacgaaaggtaacaaaagccctgcaatcagtcccaattttcgaagactgagaaaccc tgatcaaccgacggataaaaaggaagacttcaaggatgtgagcgatgtggactccttggacctcttgtttatttgtatga gagaagacatgcttaattacagtacacgcatcgtgatagatgaagatgcgatgaggggcatgacagacaacgacctggcc gaattccttccgaataagggagatatatttgctttgagaagttttctgtcaaacaaattaagtgacacaaaatcaaaaaa gctaagccttatggacaaactacgtgatcgccttgaaactaccagaaatagcaaacgcccttcgaaagacgatgaagtat catctagaaaaaaaattccaaaatttaacgcaaagaaacaagttcatagagttgacttgggctggtaccattttaatgag actaaaggttcgtactctcaagttagagaaaaattcggaggtgggaccagaactctactattagataagaagatgaacaa gacagccgttatacagaaatgccttgaattatttttcccagacggagaaagtagacatgggtctctatcagatatgatcg tcgatctaacagacttccaactaaaaccattaccggacgaagcaacgacaattggagatatgatagacaaggctaaatta cataagattcgattttacttgaatacaaagatgaaaaagacaaatagttcagaaaaggtagagattgaagacgaagaaat gcccgtactgaaatttaaaaaaagttcagcaagaacatattctgacgaaaaagagtttgagatacaggtaccagaggaag gaaatagtgtagaaaaccagaatacagttatcataccatcaacatcaactccagtgcattcagattcaacgcccatgcaa gacttaagctcgaatacagaacaatcctatatttatattgaaaatgatataaatggttatgacagtattcatacagatgg agcttatacattagatataccaaatgtgtgggaagacagtctcggagaagtcgcttttacacgtgttttgccgacattgc cggttagagatccaagaaagtttgacatagtggtacatagaggacacatgctacaagatcttatcacgtttttcaaggac aacactgacgtagatttcagaatcgacaccatatctgtacagataatcctcccaaatggagacaaagaacaagcctatga tgatggaggggtgatgagagacatgttgacggaattttgggcagacttttatgagcaatgcacaactggacaaaccataa gagtaccatgtttgcgccatgatttccaacaaaatgactggaaggcagttgcaaggattcttgcaatgggatggattatg cagaggatgctaccaataaggctggcaccgagttttctgaaatcgtctttgtttggttcagcgtcagaaagtgtgagaga ggaatttcttttgtttattcctcctggggaacagaaaattctaaaagatgccattgaaaaattcgattcggtggaccagg atgagttgattgaggttttgtccatacatgaaagcaaggtgagagcgacaaatgaaaatatagggacagtcgtagatcaa atagctcacttggaacttgtacaggagacagcgtttgtcagggagtgtttctttgaagtattgatgcttttcgctttgaa tatagatgtggatctagagtacagtaagatggaaccatcgtccaagaagatattgtctattcttgtttgtgaagagtcag aatcggaatcgtttaaacatctgaaaagatacattagagagatggacaccgatttaaaaatgctgcgttgctttcttaga ttcgtcacggcaagcgacttgcttctgtatgacaaatacggaaaataccatacaataactgtcaatttggtggacttgac cggtatatcaagaaggcccgttgctcacacttgtgggcgtgttcttgagatccccaaaacgtatgaaagctatgtcattt tcaagtgtgaaatgaatgctgttctaaacagcaacgtctgggtaatggacatagcatag |
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Protein
| Protein ID | pfu_aug2.0_4.1_13345.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4.1_13345.t1 MWVQIEAKTKGNKSPAISPNFRRLRNPDQPTDKKEDFKDVSDVDSLDLLFICMREDMLNYSTRIVIDEDAMRGMTDNDLA EFLPNKGDIFALRSFLSNKLSDTKSKKLSLMDKLRDRLETTRNSKRPSKDDEVSSRKKIPKFNAKKQVHRVDLGWYHFNE TKGSYSQVREKFGGGTRTLLLDKKMNKTAVIQKCLELFFPDGESRHGSLSDMIVDLTDFQLKPLPDEATTIGDMIDKAKL HKIRFYLNTKMKKTNSSEKVEIEDEEMPVLKFKKSSARTYSDEKEFEIQVPEEGNSVENQNTVIIPSTSTPVHSDSTPMQ DLSSNTEQSYIYIENDINGYDSIHTDGAYTLDIPNVWEDSLGEVAFTRVLPTLPVRDPRKFDIVVHRGHMLQDLITFFKD NTDVDFRIDTISVQIILPNGDKEQAYDDGGVMRDMLTEFWADFYEQCTTGQTIRVPCLRHDFQQNDWKAVARILAMGWIM QRMLPIRLAPSFLKSSLFGSASESVREEFLLFIPPGEQKILKDAIEKFDSVDQDELIEVLSIHESKVRATNENIGTVVDQ IAHLELVQETAFVRECFFEVLMLFALNIDVDLEYSKMEPSSKKILSILVCEESESESFKHLKRYIREMDTDLKMLRCFLR FVTASDLLLYDKYGKYHTITVNLVDLTGISRRPVAHTCGRVLEIPKTYESYVIFKCEMNAVLNSNVWVMDIA |
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