Gene
| Gene Model ID | pfu_aug2.0_4.1_13347 |
|---|---|
| Locus | scaffold4.1 : 711503 ... 713332 : - |
| To GenomeBrowser | scaffold4.1:711503..713332 |
| Genes list of scaffold | scaffold4.1 |
| Synonym | pfu_aug1.0_4680.1_30766 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| neurocalcin-delta | GO:0003073 GO:0005622 GO:0008092 GO:0019722 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4.1_13347.t1 | 5 | 1 | EF-hand_1 | 10 | 18 | 7.0e-21 | 71.8 | 0.99 | 1300.0 | -1.0 |
| pfu_aug2.0_4.1_13347.t1 | 3 | 1 | EF-hand_7 | 10 | 20 | 7.1e-20 | 70.9 | 2.4 | 3200.0 | -1.7 |
| pfu_aug2.0_4.1_13347.t1 | 3 | 1 | EF-hand_8 | 39 | 83 | 8.7e-17 | 60.4 | 5.5e-10 | 7.5e-07 | 28.6 |
| pfu_aug2.0_4.1_13347.t1 | 5 | 2 | EF-hand_1 | 40 | 51 | 7.0e-21 | 71.8 | 0.69 | 930.0 | -0.5 |
| pfu_aug2.0_4.1_13347.t1 | 3 | 2 | EF-hand_7 | 40 | 82 | 7.1e-20 | 70.9 | 1.1e-07 | 0.00015 | 21.8 |
| pfu_aug2.0_4.1_13347.t1 | 4 | 1 | EF-hand_6 | 40 | 50 | 4.1e-18 | 63.5 | 2.5 | 3400.0 | -1.6 |
| pfu_aug2.0_4.1_13347.t1 | 4 | 1 | EF-hand_5 | 40 | 48 | 3.8e-10 | 38.6 | 0.68 | 920.0 | -0.6 |
| pfu_aug2.0_4.1_13347.t1 | 5 | 3 | EF-hand_1 | 62 | 83 | 7.0e-21 | 71.8 | 4.4e-09 | 5.9e-06 | 25.2 |
| pfu_aug2.0_4.1_13347.t1 | 4 | 2 | EF-hand_6 | 62 | 83 | 4.1e-18 | 63.5 | 3.5e-06 | 0.0048 | 16.6 |
| pfu_aug2.0_4.1_13347.t1 | 4 | 2 | EF-hand_5 | 63 | 83 | 3.8e-10 | 38.6 | 1.4e-06 | 0.0019 | 17.4 |
| pfu_aug2.0_4.1_13347.t1 | 3 | 2 | EF-hand_8 | 94 | 122 | 8.7e-17 | 60.4 | 7.9e-06 | 0.011 | 15.3 |
| pfu_aug2.0_4.1_13347.t1 | 5 | 4 | EF-hand_1 | 97 | 123 | 7.0e-21 | 71.8 | 4.8e-10 | 6.5e-07 | 28.2 |
| pfu_aug2.0_4.1_13347.t1 | 4 | 3 | EF-hand_6 | 97 | 122 | 4.1e-18 | 63.5 | 1.1e-09 | 1.5e-06 | 27.5 |
| pfu_aug2.0_4.1_13347.t1 | 3 | 3 | EF-hand_7 | 98 | 163 | 7.1e-20 | 70.9 | 2.7e-17 | 3.6e-14 | 52.6 |
| pfu_aug2.0_4.1_13347.t1 | 4 | 3 | EF-hand_5 | 98 | 120 | 3.8e-10 | 38.6 | 4.7e-07 | 0.00063 | 18.9 |
| pfu_aug2.0_4.1_13347.t1 | 3 | 3 | EF-hand_8 | 120 | 166 | 8.7e-17 | 60.4 | 1.0e-06 | 0.0014 | 18.2 |
| pfu_aug2.0_4.1_13347.t1 | 5 | 5 | EF-hand_1 | 142 | 166 | 7.0e-21 | 71.8 | 4.7e-08 | 6.3e-05 | 21.9 |
| pfu_aug2.0_4.1_13347.t1 | 4 | 4 | EF-hand_6 | 142 | 165 | 4.1e-18 | 63.5 | 9.8e-07 | 0.0013 | 18.4 |
| pfu_aug2.0_4.1_13347.t1 | 4 | 4 | EF-hand_5 | 142 | 162 | 3.8e-10 | 38.6 | 0.005 | 6.8 | 6.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4.1_13347.t1 | gi|742243848|ref|XP_010863450.1| | PREDICTED: neurocalcin-delta B [Esox lucius] | 3.0e-28 |
| pfu_aug2.0_4.1_13347.t1 | gi|675863106|ref|XP_009017113.1| | hypothetical protein HELRODRAFT_185556 [Helobdella robusta] | 1.0e-27 |
| pfu_aug2.0_4.1_13347.t1 | gi|597782379|ref|XP_007254734.1| | PREDICTED: neurocalcin-delta B-like isoform X1 [Astyanax mexicanus] | 1.0e-27 |
| pfu_aug2.0_4.1_13347.t1 | gi|260797014|ref|XP_002593499.1| | hypothetical protein BRAFLDRAFT_116053 [Branchiostoma floridae] | 2.0e-27 |
| pfu_aug2.0_4.1_13347.t1 | gi|617394693|ref|XP_007550524.1| | PREDICTED: neurocalcin-delta [Poecilia formosa] | 2.0e-27 |
Transcript
| Transcript ID | pfu_aug2.0_4.1_13347.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4.1_13347.t1 atgggtcaaaagacgagcaaggaggataaaaagttaatgaacgaatacgatctaacgaaggaagacttggagggtttgaa agcaggtttcaacgacaaatgcacaagggcacgcgtactgactaaaacagaattccgggaattatacggcagtctttttc ccggtgacgcagtggaatatgccgatgaaatgttccgtattgccgataccgatgataacggacaagtagattttacggaa tttgtacgaagcctgtgtttgtgtgacagtaaaaatatcgacgataaaatcaagatagcattcaaactatacgacaggga caacagtggcaccatcagcaaagcggaggtcagagaccttttgaaggcgtactcctcccttataaaagatgacgatcagc gtactacagagaggattgccagcgatattttccatatgatggatgaggaccaggacgaagaaatcacctttgaggagttt agtgaggcagctaaaagatacccagacattctaaacgttctcagtccaaaacccccagactggcaggaataa |
|
Protein
| Protein ID | pfu_aug2.0_4.1_13347.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4.1_13347.t1 MGQKTSKEDKKLMNEYDLTKEDLEGLKAGFNDKCTRARVLTKTEFRELYGSLFPGDAVEYADEMFRIADTDDNGQVDFTE FVRSLCLCDSKNIDDKIKIAFKLYDRDNSGTISKAEVRDLLKAYSSLIKDDDQRTTERIASDIFHMMDEDQDEEITFEEF SEAAKRYPDILNVLSPKPPDWQE |
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