Gene
| Gene Model ID | pfu_aug2.0_4.1_13356 |
|---|---|
| Locus | scaffold4.1 : 796943 ... 809842 : + |
| To GenomeBrowser | scaffold4.1:796943..809842 |
| Genes list of scaffold | scaffold4.1 |
| Synonym | pfu_aug1.0_108.1_50634 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4.1_13356.t1 | 1 | 1 | Ebp2 | 11 | 281 | 0.0 | 294.8 | 0.0 | 0.0 | 294.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4.1_13356.t1 | gi|524911724|ref|XP_005110722.1| | PREDICTED: probable rRNA-processing protein EBP2-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_4.1_13356.t1 | gi|524911726|ref|XP_005110723.1| | PREDICTED: probable rRNA-processing protein EBP2-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_4.1_13356.t1 | gi|260817991|ref|XP_002603868.1| | hypothetical protein BRAFLDRAFT_70504 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_4.1_13356.t1 | gi|676477251|ref|XP_009061053.1| | hypothetical protein LOTGIDRAFT_126319 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_4.1_13356.t1 | gi|241835158|ref|XP_002415028.1| | conserved hypothetical protein [Ixodes scapularis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_4.1_13356.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4.1_13356.t1 atggaatcgtcttcagacgcagagagcgttgaatctgacgaaatgcttcaagaggcatttgcagcaggaagattaaaacc aggactaagtgtggagcttcctgctaaatctcaagttaataatgtggctggtatgaagcaaaaattaaaggaatttcaga ataatttagagtggatagaacggctagatttgaccaatgctccggctccagctgctcctggtatggaactagaaggggaa gatgatgtacataatgactttactagggaactcagattttacagacaagcccaagcttcagtattagaaggtatacctcg gttacaagcattagatatccaaacaaaacgtcctgaggattactttgcagagatggcaaagtcagacgatcatatgaaaa gggtcagagagaaactgttagagaaacaaatgtccatagataggagggaaaaagtgaggaagcagagagatctacgtaaa tatggtaaaaaggttcaacaagaagttctgttaaaaagacaaaaagagaagaaagagatgcttgaatctgtgaagagata tagaaaaggtcaacaagataaaatagactttctaaatgatctggatgataagtccgagaaacccagaaataaacaacaga gagataataaaaagaacagaattaataagaaaagagaatttaaaaacaaaaagtttggatttggtggacagaagaaacgc tccaagatgaacacagcttctagtgcaggagatatgtcagatttcaatccacgattacatcagaaaaaagccggcaaacc aaagggtaaaatggcaaacaaaagacctggtaaatcaaaacggatgaaaaataaaaacaagaagagatga |
|
Protein
| Protein ID | pfu_aug2.0_4.1_13356.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4.1_13356.t1 MESSSDAESVESDEMLQEAFAAGRLKPGLSVELPAKSQVNNVAGMKQKLKEFQNNLEWIERLDLTNAPAPAAPGMELEGE DDVHNDFTRELRFYRQAQASVLEGIPRLQALDIQTKRPEDYFAEMAKSDDHMKRVREKLLEKQMSIDRREKVRKQRDLRK YGKKVQQEVLLKRQKEKKEMLESVKRYRKGQQDKIDFLNDLDDKSEKPRNKQQRDNKKNRINKKREFKNKKFGFGGQKKR SKMNTASSAGDMSDFNPRLHQKKAGKPKGKMANKRPGKSKRMKNKNKKR |
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