Gene
| Gene Model ID | pfu_aug2.0_4.1_13358 |
|---|---|
| Locus | scaffold4.1 : 826783 ... 841222 : + |
| To GenomeBrowser | scaffold4.1:826783..841222 |
| Genes list of scaffold | scaffold4.1 |
| Synonym | pfu_aug1.0_108.1_50632 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| fizzy-related protein homolog isoform x2 | GO:0005515 GO:0005654 GO:0005680 GO:0008284 GO:0031145 GO:0031965 GO:0040020 GO:0045732 GO:0051488 GO:0070306 GO:0090344 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4.1_13358.t1 | 7 | 1 | WD40 | 116 | 127 | 1.5e-34 | 116.6 | 2.5 | 9100.0 | -3.2 |
| pfu_aug2.0_4.1_13358.t1 | 7 | 2 | WD40 | 171 | 191 | 1.5e-34 | 116.6 | 0.45 | 1700.0 | -0.9 |
| pfu_aug2.0_4.1_13358.t1 | 7 | 3 | WD40 | 203 | 235 | 1.5e-34 | 116.6 | 2.2e-07 | 0.0008 | 19.1 |
| pfu_aug2.0_4.1_13358.t1 | 2 | 1 | eIF2A | 207 | 250 | 1.8e-07 | 31.0 | 2.9e-05 | 0.11 | 12.2 |
| pfu_aug2.0_4.1_13358.t1 | 7 | 4 | WD40 | 241 | 271 | 1.5e-34 | 116.6 | 1.3e-08 | 4.7e-05 | 23.1 |
| pfu_aug2.0_4.1_13358.t1 | 7 | 5 | WD40 | 285 | 319 | 1.5e-34 | 116.6 | 5.4e-13 | 2.0e-09 | 36.9 |
| pfu_aug2.0_4.1_13358.t1 | 2 | 2 | eIF2A | 308 | 405 | 1.8e-07 | 31.0 | 1.4e-06 | 0.0053 | 16.4 |
| pfu_aug2.0_4.1_13358.t1 | 7 | 6 | WD40 | 324 | 364 | 1.5e-34 | 116.6 | 1.1e-09 | 3.9e-06 | 26.5 |
| pfu_aug2.0_4.1_13358.t1 | 7 | 7 | WD40 | 392 | 414 | 1.5e-34 | 116.6 | 1.7e-05 | 0.062 | 13.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4.1_13358.t1 | gi|676429691|ref|XP_009045683.1| | hypothetical protein LOTGIDRAFT_224232 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_4.1_13358.t1 | gi|524911732|ref|XP_005110726.1| | PREDICTED: fizzy-related protein homolog isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_4.1_13358.t1 | gi|524911730|ref|XP_005110725.1| | PREDICTED: fizzy-related protein homolog isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_4.1_13358.t1 | gi|269785225|ref|NP_001161540.1| | fizzy-like protein [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_4.1_13358.t1 | gi|667300879|ref|XP_008581113.1| | PREDICTED: fizzy-related protein homolog [Galeopterus variegatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_4.1_13358.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4.1_13358.t1 atgttacagcccttgtcattgtcccctcggatgagccctggaagtcctgtagcctctcccagtaaggacaagtatggtga tcgttttattcctagtcgagcaggatcaagctggcatatcaactttaatatgtccaagagcagtcctgtctcctctccca caccatcggcaaaatcaaaggactctaacagtgagacggtgaaagacggcctggcatattcctgtttattaaagaatgaa ctcctggctgcaggcatagaggacctaaaggaccagcctccggatgaaagaaaagttttggtgccaaaagacagcaagaa tttgttcagataccatataccacgtagaagtttggatttcaatgatccctcgccgtactctttatcacctgtcggcagca aaagccagaaactactacgatctccaagaaaggctgtaaggaagatatcaaagattccatttaaggttttagatgcccct gaactacaggatgatttctaccttaacttagtggactggtcatcacagaatgtacttagtgtaggactaggtacatgtgt ctacctgtggagtgcatgtacaagtcaggtgacaagactgtgtgatttatccagtgacaacgacacagtgacctcagtgt catggtcagagaggggtaaccttgtcgctgtaggaactcataaaggttatgttcagatatgggatgtggcagctaccaag aagttaaacacactggagggacacacagccagagtaggtgccctagcatggaatgctgacatcttgtcatctgggagcag agacagactgatatttcagcgggatattcgtacaccgtgtgtggctccagataggaaattaataggacataaacaggaag tttgtggtctgaagtggtcacctgaccatcagcatctggcttcaggtggcaatgacaataagttatatgtgtggaatatg acgagcactaacccagtacaaacatataatgaacatttagctgcagtgaaagctatttcctggtctccccaccagcacgg attattagccagcggtgggggaacagcagatagatgtatacgtttttggaatactctgacagggcagcctttacagtgtg tagacactggatctcaagtgtgcaatctagcgtggtcaaaacattctaatgaactggcgatgtcaccagatggagaggcc atagtgacaggtgctggggatgagacattacgtttctggaatgtctttagcaagaccaggtaa |
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Protein
| Protein ID | pfu_aug2.0_4.1_13358.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4.1_13358.t1 MLQPLSLSPRMSPGSPVASPSKDKYGDRFIPSRAGSSWHINFNMSKSSPVSSPTPSAKSKDSNSETVKDGLAYSCLLKNE LLAAGIEDLKDQPPDERKVLVPKDSKNLFRYHIPRRSLDFNDPSPYSLSPVGSKSQKLLRSPRKAVRKISKIPFKVLDAP ELQDDFYLNLVDWSSQNVLSVGLGTCVYLWSACTSQVTRLCDLSSDNDTVTSVSWSERGNLVAVGTHKGYVQIWDVAATK KLNTLEGHTARVGALAWNADILSSGSRDRLIFQRDIRTPCVAPDRKLIGHKQEVCGLKWSPDHQHLASGGNDNKLYVWNM TSTNPVQTYNEHLAAVKAISWSPHQHGLLASGGGTADRCIRFWNTLTGQPLQCVDTGSQVCNLAWSKHSNELAMSPDGEA IVTGAGDETLRFWNVFSKTR |
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