Gene
| Gene Model ID | pfu_aug2.0_4.1_13363 |
|---|---|
| Locus | scaffold4.1 : 942032 ... 974245 : - |
| To GenomeBrowser | scaffold4.1:942032..974245 |
| Genes list of scaffold | scaffold4.1 |
| Synonym | pfu_aug1.0_1567.1_58572 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ubiquitin carboxyl-terminal hydrolase 24 | GO:0008234 GO:0051603 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4.1_13363.t1 | 1 | 1 | UBA | 3 | 39 | 1.5e-09 | 37.3 | 8.5e-13 | 4.2e-09 | 35.9 |
| pfu_aug2.0_4.1_13363.t1 | 2 | 1 | UCH | 340 | 434 | 0.0 | 170.5 | 0.081 | 400.0 | -0.1 |
| pfu_aug2.0_4.1_13363.t1 | 2 | 2 | UCH | 1626 | 2062 | 0.0 | 170.5 | 0.0 | 0.0 | 170.5 |
| pfu_aug2.0_4.1_13363.t1 | 2 | 1 | UCH_1 | 1626 | 2014 | 1.3e-15 | 57.6 | 3.4e-18 | 1.7e-14 | 53.9 |
| pfu_aug2.0_4.1_13363.t1 | 2 | 2 | UCH_1 | 2264 | 2291 | 1.3e-15 | 57.6 | 1.3 | 6400.0 | -3.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4.1_13363.t1 | gi|573894622|ref|XP_006635060.1| | PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 24-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_4.1_13363.t1 | gi|657740541|ref|XP_008305326.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Cynoglossus semilaevis] | 0.0 |
| pfu_aug2.0_4.1_13363.t1 | gi|511931999|ref|XP_004785005.1| | 0.0 | |
| pfu_aug2.0_4.1_13363.t1 | gi|755756839|ref|XP_011283330.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Felis catus] | 0.0 |
| pfu_aug2.0_4.1_13363.t1 | gi|556718484|ref|XP_005955135.1| | PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 24 [Pantholops hodgsonii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_4.1_13363.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4.1_13363.t1 atggaggttgacgaggagcaagtgcacacgctgctaacgatggggtttggtgagctggaggttaggaaagccctcagacg tgccaaaaatgacctcaatgaagccgtggcctacctcaccaacgatcatccaacatcatcttatgatacccttgatgaaa tagatgtagaaatgaagcctgatgtgcagtcacgtgcatctcaggagccaatgtatggcccagccccactccctagttac gaagaagtaactgcttctgcagagaagcaagatgttgggacagaaaatggtagtaaagatggtgagatggaggaattgaa ccctcttgagtttcctgtgacaaatctgtatgaactagaggggagagtatttgcagagcattggtccataccatacaaaa aggaggagtcactaggcaaatgtttgttagcagctacaaggcttgcagaagccaatatatgtgattcagacgagcattgt aaaagattcatggaaaggtgcatgacagagtcttttcaaaagttgatgacatcagctgctgttcacagatggaacagtga gattcaggaagggatatttaacatgtcccagttattgatagacctagtagtggcccggatacagcatcagcccgttccta tagatctattagacgttcttacaatggcgttgaataaggagacagaattccattatcgtaatcgctcacgtaaagatcgt gtgtactgggaagacaagtttgatgagggacagctgtttaccatcaacactagtgctaagtcatcagtggatccatatgg ctggctcactcatctcattaataggtttgctgtaaatagcggttttgatcatgtgaagaccgggttggagctggaggaca tagatgctccgaaaataggttgtgtttctgacttgctggcttccatgaagctcctatgtatacagatgtggccccagcat actaaatcactggacgacctacgtctggaagtagcactacgaatgctcaagtctcctcacttcaatgctaaaatgaattc actcaaagaggtgacaaagttaattgaggatgctacgtccagtaaggcatcaaagacggctatggaccctcaggtgatac tgaagtggctggtagatcataaagtcttatctatagctctggagggcaacattgaccaagtacagtactgtgataaagtg aaaggattggtggattttcttggatcagaactctccactgaagagctatctatgatctggaaaatgcagaatggccagac aaacaatgtgatagacaatatacactccattatagcagctgctgctgttaagtttgacgccccacaactagaacagctgt tccatctaatacaaaaaaaatggcaagatgacaatgaccgtatgaaggagaaattgttaagtttgattggaaggataggt agagatgggcgtgaccaaaccacaaccactagggttttagagcttctatgggacttgtcacaccttcctgctctttctac acacctgatcgagttggctcttgaggaacacctagctatactcagtgactcatacagtgtcagggagcaagtcaaaagac agtatgtcatcaaatgtgtcgatgatatcaaaaagggcatcctccatgatttgaataagaatcacgatgtgataaagttg gtaacccagagtttggtcaagtgtcacaaacaggccgtgggtaatgtaggggatggtcagttaggtgctaaaaccgtggt agatggacgctaccctcattctgagtttgtgacgacacacctacagttcctacaatacttgttacaagaaggtgccttat atctccccttgaacagagcaagggatatatggggagctctcgtaggaggggcagaatcatgtccctgggacagagagggc attctccatgatttgaataagaatcacgatgtgataaagttggtaacccagagtttggtcaagtgtcacaaacaggctgt gggtaatgtaggggatggtcagttaggtgctaaaaccgtggtagatggacgttaccctcattctgagtttgtaacaacac atctacaattcctacaatacttgctacaagaaggtgccttatatctccccttgaacagagcaagggatatatggggagct ctcgtaggaggggcagaatcatgcccctgggacagagagacttgctatgagtggttcagtaagggaatatcagacttgga aatggagacacagagtcagctctttctgaaagaaattctgaagttagatgtctcaaaaatttctgaagaaggattcacct gttttaagagatattttgaaaatgtgaacaagtatgaacatcgcttgaagtctgatggcaacaaattgattgttgacaag gcagagctgtttgggctggactacatatggcagatttgtttgaacactgcggatgaaggtattgctgagtcagccataca acttttactcaccgtgtcttacacaaacctggctccacgactcaaaaaggatccagtttctctacacaaaagctatgata ggtatgactggtattactgggccaccaaaactcttatgatggctatcgtcaaggaagtggctaatgtgctgctaccatca gggtctataaaactgatgaacatagaaagattactatggctagctgagatgtacgtactgaatgtggaagagaatcacca cacccccagaacaatcctacctcatggttcctccttccacggtcatcaaatcaacctcttcattacgtgtgaatcatcaa aacaagaattcatgttactgtgtcacagtaatgagtccttggcctctgtgaaagtgaggatagctgacagaatgaggcag aatgctgataatatacaaataatcgctcaggaaaaaccattagggccatctaaagaccagaaactgcttcaccaactaga cctacaggacaaccaggtgatacaagtcagactgtcaacatcggctggacaacctctcacaatcaaggagcccactacac caacggcaaaacagacctttgatctagaacaagagaagatgttacctggtgttgtaatgtcagcagggggacaggtgttt gagatgctttaccaactggctgatctagatgaaccaaggattacatctcgggtgaggaagttactaatgctgatacctac agatccacaaatactggacaatctggattccatcaacagtaacaagataatgaagcagtcaacagatgacatgagcccga gggcaagtcctaggaagacgggatcacagacgtccttgggccctaacagtccccgcctacctcctaaggacatactcaag tcattgtttgatgccagctctcaggacatgtctgctttcagagttctatataatctcgaggtattgagcagtaagttgat gcctgtatcccaggacatggggagtcgactctgtgcccagcactttggtgaggatttcctgaatgcagggggactgcagg tagtggtcactgtcttacaggccgaagccctcaaaccagaggtcaattacaccatacgacagggctgctactctatatgt ctacagctggctaggttcctcctctgtggacagactgtgaccaatagcagctcagggaaagtacagggggaggagctaaa gacaggagctaacacactgtcagccacgccccctacaaccagccccctgtcaatcgtcatagataaaccatcaagtggca gtcatgctgtgcagacaatgggagtactggaattcacagagactgtatcttgctttatgagggtcacatgggcagctgct gctggaaggttacacctcctcagctcaaatcaaccaatcatagagagttctgtaggatatgggtgtggtcatcgcagtag acaaagcagcactggtagtactggtagtacagatagtggaagtgactgtcagagtttacatgctggtgtgtgtataaaga cttcctccatttgtacacaggactgtactatagccaaggaagctctggaaatactagtcacatgtctacaactcaggagt gaactcatagcctccttttactccttaccatgtgttagtgatttcatcattgagatactggtaggctgcagtcatacaga catacggaatgccgccctagaccagttttacctcctcagtcagacagaggttcttacctccgagggtaactcgctacaac aaacccctcatcatttcatgctgcaggttctgctcaaggcttacctcccattctgggtgtcatctgcctccactagaggc gctagtcaaaggttattacatcagtgtacccagtattttgacctacgatgtcagctgttggattccttgtcaacggagga ccaaaccaagctacagttagatttgtcttccatgttagaggatgagatcacatggttaagtaactacgtaccatccacaa accccgacctgagtgagacggacaactgcctgctagccgggcatctcaaactcataaagacgttatttacctgcgagggc atagacagggaggaatttggacgtactctagtgtatgaaattctacatgactttctcttcccagcatccaaagttatgat ggacagcatgaattccacaaacccagataccttggaggaagtgctaccaaagtgtaacgagtcagactcgagggtagccg cttaccagctattgatagagcttagtaaggatagcttacccatgttacaggatatctgtaaacagctgatagagatgcat catctaccacaccctgactgtgctaatgaatgggagtacttgcctcctgttgatggtcgggctcgttgtggttttgtcgg cctgaaaaatggtggagccacgtgttatatgaattctgtaatacagcagctgtacatggtacctggtttaccacaggtca tactaggcatggaggaagatggaccagaggaagaaaggaggaaggtagagtacccatctgtcaatgctgttgctgataga ctactagttgcccctgtcagcactgtggactgtgagaggggattcagtagacagaatctgatcaagacaaacctcaggtt acctcaagtcatactgggaatgaatgaaaatgaactagaggaagaaagtgtatttttccagttccagcaggtgtttggtc acttattagacagtaagttacaatatcatgaaccagataagttctggaaggtgtttaagctgtggggacagacagttaac atcagggaacaacaagatgccttcgacttcttccaggctctgattgatcaagtagatgaacatatgaagaaaaccagtaa ggaggaaatattcaaaaagactttctcaggagtgtactcagatcagaagatctgtaaggactgtccacacagatacgaga gagaggagcatttctacgccttaaatctgacagtgaagaatgccaccttacaggattcactagatcagtttgttaagggg gaactactggagggggacaatgcttatttttgtgagaaatgtggtgaaaaggcatttttggatacaaaagtacatgagtt agatgaacgtgaatattacctttatgtatttagttacattgatgancctccattactatgtattcaacttaagagatttg gttacgactgggaggctaatagagcactcaagtttgatgaccacttcaaatttccctgggtattagatatggaaccttac actacagagggtatggcgcggagagaagaacacatggagaatgtagagtctggatctgaatccgaaagcggagattttat gacaaatagtgatgacagagagctagagatcatcgcggggaggcatgtagaacagaaacagattaactatgagttagtgg gcattgtggtacatagtggacaggctaatgctgggcattattactcctttatcaaagatagaagaggtgatgtgatgacc aatcaacagagagggaaatggtttaaattcaatgatacggtagtagaggaatttgagatgagtgacgcgagtctggaagc ggaatgttttggtggaacgtacaaagccaagatagctgaacaatcgtccgtttccacatatcctgatgatagggtccggt attggaatggctacatgctgttctacgaaaaaatacaggatcatccaaaaactccgatctctgccaaaaagtccaagatt gaggctcgaaaaacattaccaaaaggaaaaagccgtatggactcggacagccttatggagcttacagagcttgtacataa aggagagaggaaaggaatatttatggatcagatgccagccagcattcaccaagtcattcaagcagaaaatcttaccttcg ttaaaaatcgtgatgtctacaacactgagtacttcagatttgttaaagaccttgtgggggcaaacttgtgcaatgaatgc cataagaactttgctcagatgtcagtcaagtctttagaattaggaatgaaatttttattcaacacattcttcagaacaaa aaggaagtcaaaacaagatttagatgagtggatagacgttatagagagtttactagagaaaagtaaggaagcttgtgatt ggttggtggaatatctcagctgtcagaatggggtgtcttatatcaagccatttcttttagaatgtcctaacagagatgta cgatttacaatggctcgtattatggatagagttatgcttagttattttcatcatggaggcgttccaactcacaaacagtt caatgagattttagaaaaccttcttcaaatgctgaacaaagatgtgatagaccattgtaaaaattcctggaattattttc aagttctaaaatcctatgtgcaatatggcaccaaatctgttagtcacatgttcctacgtcaaggattccaaaggctggtt tcatttctccttggtgtagacaatggctctgaatctacaacaaggagatggagttctatacagtcacgggagtttgagaa tctacattctacactggcaatactagtgttaaactgtgaagtgtcacaacactggacagaaggtcaccgtcttctttag |
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Protein
| Protein ID | pfu_aug2.0_4.1_13363.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4.1_13363.t1 MEVDEEQVHTLLTMGFGELEVRKALRRAKNDLNEAVAYLTNDHPTSSYDTLDEIDVEMKPDVQSRASQEPMYGPAPLPSY EEVTASAEKQDVGTENGSKDGEMEELNPLEFPVTNLYELEGRVFAEHWSIPYKKEESLGKCLLAATRLAEANICDSDEHC KRFMERCMTESFQKLMTSAAVHRWNSEIQEGIFNMSQLLIDLVVARIQHQPVPIDLLDVLTMALNKETEFHYRNRSRKDR VYWEDKFDEGQLFTINTSAKSSVDPYGWLTHLINRFAVNSGFDHVKTGLELEDIDAPKIGCVSDLLASMKLLCIQMWPQH TKSLDDLRLEVALRMLKSPHFNAKMNSLKEVTKLIEDATSSKASKTAMDPQVILKWLVDHKVLSIALEGNIDQVQYCDKV KGLVDFLGSELSTEELSMIWKMQNGQTNNVIDNIHSIIAAAAVKFDAPQLEQLFHLIQKKWQDDNDRMKEKLLSLIGRIG RDGRDQTTTTRVLELLWDLSHLPALSTHLIELALEEHLAILSDSYSVREQVKRQYVIKCVDDIKKGILHDLNKNHDVIKL VTQSLVKCHKQAVGNVGDGQLGAKTVVDGRYPHSEFVTTHLQFLQYLLQEGALYLPLNRARDIWGALVGGAESCPWDREG ILHDLNKNHDVIKLVTQSLVKCHKQAVGNVGDGQLGAKTVVDGRYPHSEFVTTHLQFLQYLLQEGALYLPLNRARDIWGA LVGGAESCPWDRETCYEWFSKGISDLEMETQSQLFLKEILKLDVSKISEEGFTCFKRYFENVNKYEHRLKSDGNKLIVDK AELFGLDYIWQICLNTADEGIAESAIQLLLTVSYTNLAPRLKKDPVSLHKSYDRYDWYYWATKTLMMAIVKEVANVLLPS GSIKLMNIERLLWLAEMYVLNVEENHHTPRTILPHGSSFHGHQINLFITCESSKQEFMLLCHSNESLASVKVRIADRMRQ NADNIQIIAQEKPLGPSKDQKLLHQLDLQDNQVIQVRLSTSAGQPLTIKEPTTPTAKQTFDLEQEKMLPGVVMSAGGQVF EMLYQLADLDEPRITSRVRKLLMLIPTDPQILDNLDSINSNKIMKQSTDDMSPRASPRKTGSQTSLGPNSPRLPPKDILK SLFDASSQDMSAFRVLYNLEVLSSKLMPVSQDMGSRLCAQHFGEDFLNAGGLQVVVTVLQAEALKPEVNYTIRQGCYSIC LQLARFLLCGQTVTNSSSGKVQGEELKTGANTLSATPPTTSPLSIVIDKPSSGSHAVQTMGVLEFTETVSCFMRVTWAAA AGRLHLLSSNQPIIESSVGYGCGHRSRQSSTGSTGSTDSGSDCQSLHAGVCIKTSSICTQDCTIAKEALEILVTCLQLRS ELIASFYSLPCVSDFIIEILVGCSHTDIRNAALDQFYLLSQTEVLTSEGNSLQQTPHHFMLQVLLKAYLPFWVSSASTRG ASQRLLHQCTQYFDLRCQLLDSLSTEDQTKLQLDLSSMLEDEITWLSNYVPSTNPDLSETDNCLLAGHLKLIKTLFTCEG IDREEFGRTLVYEILHDFLFPASKVMMDSMNSTNPDTLEEVLPKCNESDSRVAAYQLLIELSKDSLPMLQDICKQLIEMH HLPHPDCANEWEYLPPVDGRARCGFVGLKNGGATCYMNSVIQQLYMVPGLPQVILGMEEDGPEEERRKVEYPSVNAVADR LLVAPVSTVDCERGFSRQNLIKTNLRLPQVILGMNENELEEESVFFQFQQVFGHLLDSKLQYHEPDKFWKVFKLWGQTVN IREQQDAFDFFQALIDQVDEHMKKTSKEEIFKKTFSGVYSDQKICKDCPHRYEREEHFYALNLTVKNATLQDSLDQFVKG ELLEGDNAYFCEKCGEKAFLDTKVHELDEREYYLYVFSYIDXPPLLCIQLKRFGYDWEANRALKFDDHFKFPWVLDMEPY TTEGMARREEHMENVESGSESESGDFMTNSDDRELEIIAGRHVEQKQINYELVGIVVHSGQANAGHYYSFIKDRRGDVMT NQQRGKWFKFNDTVVEEFEMSDASLEAECFGGTYKAKIAEQSSVSTYPDDRVRYWNGYMLFYEKIQDHPKTPISAKKSKI EARKTLPKGKSRMDSDSLMELTELVHKGERKGIFMDQMPASIHQVIQAENLTFVKNRDVYNTEYFRFVKDLVGANLCNEC HKNFAQMSVKSLELGMKFLFNTFFRTKRKSKQDLDEWIDVIESLLEKSKEACDWLVEYLSCQNGVSYIKPFLLECPNRDV RFTMARIMDRVMLSYFHHGGVPTHKQFNEILENLLQMLNKDVIDHCKNSWNYFQVLKSYVQYGTKSVSHMFLRQGFQRLV SFLLGVDNGSESTTRRWSSIQSREFENLHSTLAILVLNCEVSQHWTEGHRLL |
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