Gene
| Gene Model ID | pfu_aug2.0_40.1_00104 |
|---|---|
| Locus | scaffold40.1 : 252026 ... 264420 : + |
| To GenomeBrowser | scaffold40.1:252026..264420 |
| Genes list of scaffold | scaffold40.1 |
| Synonym | pfu_aug1.0_16226.1_03687 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_40.1_00104.t1 | 1 | 1 | CUE | 59 | 98 | 2.6e-12 | 45.9 | 3.2e-16 | 4.7e-12 | 45.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_40.1_00104.t1 | gi|524901554|ref|XP_005107183.1| | PREDICTED: uncharacterized protein LOC101847139 [Aplysia californica] | 0.0 |
| pfu_aug2.0_40.1_00104.t1 | gi|676449062|ref|XP_009051933.1| | hypothetical protein LOTGIDRAFT_231527 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_40.1_00104.t1 | gi|156384922|ref|XP_001633381.1| | predicted protein [Nematostella vectensis] | 7.0e-16 |
| pfu_aug2.0_40.1_00104.t1 | gi|584008802|ref|XP_006799358.1| | PREDICTED: CUE domain-containing protein 1-like isoform X3 [Neolamprologus brichardi] | 1.0e-15 |
| pfu_aug2.0_40.1_00104.t1 | gi|542255420|ref|XP_005463353.1| | PREDICTED: CUE domain-containing protein 1-like isoform X3 [Oreochromis niloticus] | 2.0e-15 |
Transcript
| Transcript ID | pfu_aug2.0_40.1_00104.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_40.1_00104.t1 atggcaacagctgacacagaggcacagaaaccaggaagtaggaggcgacggcatcagccatccaggactgaacatgactt cctgcctgcagatgctgttccacctgctagaccccctcccttgtcaaggtcgcagtctcacagagaaagacctacaaaac agcttgatttttaccaagcgatgtcagatttcaaggccatgtttcctaccatggattcagatgtgatagaggccgtcttg cggtcaaatgacggggccgtagatgatacgattgaccagctactgaccatgagtatagataccgaggatccatcggccat tattgatgttcctactgaacttctctcaccagtgaacgatccttgtcccagttataacgaggccagatcagaggactctc ccccctcgtactcggaagccgtgcaatcccagaagtccaagcctgcgtctccgcatgctgacgacgtagatcatggcacc agtagtatatggacaacgcccatagctagtcaagaaaagtcgcttaagccgtctataaaactgtcaccatcacgcaagaa aagtcctaacagcaggtcaccgtcttcaacggagcgtaagtctagctcccatggagaatccaggtcctcacaccatcacc atcatcatagagggcgccaccgacgacatcggagtaaaaccgaagatcagattgacgaactagcaatgtctaacaccgag ataaaacgaccgatatctcttacaaacatgtcactccctgcccctctacaaagtgttacgtctaaaaagggttacagaaa ctggaatccccctatgctaggtgctttacccgatgattttctaagacttactgtgccaacaaaaccttttactcacaccc ccgaaaaattggactggtccagttggcctagtccatacaaccatggagggatggcaggtcccgaattacttcctagatca cataatatttcaagaaaagacagacactcggaaaagcaatcaagaagtcataatgaaaagaagaaactgtctcgtagtgt tagcgagagatctaatggacacggtgctttaagaaatatggacagattacctttggttcattcacacacggccagacatg atacgtcacctggtcttccaaagtcattgattatatcgactcatgagttcagccaggacatgctggacgaaaagatgaag gagaacgagagaaggaggagaaaagccgtcaagaacgtcgatttagaaatgtcacaatatttagaggacgaacgactggc tataatgctgcagaatacagagttcctagaggagttaaggggaaatgaagatttcatgaaaactttggaaaaagatcgta tgaatttatcggcctttgagcccattttgccgtcaccagttgttgagagtccacctgtggttgaacctccacctataaat aaggaacaagatggctacggtcgtgataaacaggaacacttagatgccttccccttcagtcaacccttacctccaaataa agacgaagatgcagaactacgcaggcaactcaaaaacatggggggcgcttcgaagaaacaattcatggctcttgctaaga aatttttctccaggaggaagaagaagaattcattgaaatacattcagaaggagaaactagcgccctctatggtgaatctg ctagatagcgatgaagaagattacgaccctgagccagatttaccgtacaatcaggacactgagattgagcctctgccgga caacttgacagctgttccctctcacagaacagttcagaggcccatgtaccacgtggacactgtaaccagttaccatgaca acaaggcaacaactgatatggtgtaa |
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Protein
| Protein ID | pfu_aug2.0_40.1_00104.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_40.1_00104.t1 MATADTEAQKPGSRRRRHQPSRTEHDFLPADAVPPARPPPLSRSQSHRERPTKQLDFYQAMSDFKAMFPTMDSDVIEAVL RSNDGAVDDTIDQLLTMSIDTEDPSAIIDVPTELLSPVNDPCPSYNEARSEDSPPSYSEAVQSQKSKPASPHADDVDHGT SSIWTTPIASQEKSLKPSIKLSPSRKKSPNSRSPSSTERKSSSHGESRSSHHHHHHRGRHRRHRSKTEDQIDELAMSNTE IKRPISLTNMSLPAPLQSVTSKKGYRNWNPPMLGALPDDFLRLTVPTKPFTHTPEKLDWSSWPSPYNHGGMAGPELLPRS HNISRKDRHSEKQSRSHNEKKKLSRSVSERSNGHGALRNMDRLPLVHSHTARHDTSPGLPKSLIISTHEFSQDMLDEKMK ENERRRRKAVKNVDLEMSQYLEDERLAIMLQNTEFLEELRGNEDFMKTLEKDRMNLSAFEPILPSPVVESPPVVEPPPIN KEQDGYGRDKQEHLDAFPFSQPLPPNKDEDAELRRQLKNMGGASKKQFMALAKKFFSRRKKKNSLKYIQKEKLAPSMVNL LDSDEEDYDPEPDLPYNQDTEIEPLPDNLTAVPSHRTVQRPMYHVDTVTSYHDNKATTDMV |
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