Gene
| Gene Model ID | pfu_aug2.0_40.1_00113 |
|---|---|
| Locus | scaffold40.1 : 538420 ... 550780 : + |
| To GenomeBrowser | scaffold40.1:538420..550780 |
| Genes list of scaffold | scaffold40.1 |
| Synonym | pfu_aug1.0_123304.1_06472 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_40.1_00113.t1 | 2 | 1 | Abhydrolase_3 | 137 | 283 | 0.0 | 172.1 | 1.10001e-40 | 2.8e-37 | 128.3 |
| pfu_aug2.0_40.1_00113.t1 | 2 | 1 | Peptidase_S9 | 185 | 228 | 4.7e-07 | 29.2 | 3.7e-08 | 9.1e-05 | 21.7 |
| pfu_aug2.0_40.1_00113.t1 | 2 | 2 | Abhydrolase_3 | 339 | 403 | 0.0 | 172.1 | 3.2e-14 | 7.9e-11 | 41.9 |
| pfu_aug2.0_40.1_00113.t1 | 2 | 2 | Peptidase_S9 | 365 | 425 | 4.7e-07 | 29.2 | 0.0037 | 9.1 | 5.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_40.1_00113.t1 | gi|449486803|ref|XP_002194687.2| | 0.0 | |
| pfu_aug2.0_40.1_00113.t1 | gi|260800666|ref|XP_002595218.1| | hypothetical protein BRAFLDRAFT_241264 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_40.1_00113.t1 | gi|260796251|ref|XP_002593118.1| | hypothetical protein BRAFLDRAFT_209839 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_40.1_00113.t1 | gi|525020701|ref|XP_005057862.1| | PREDICTED: arylacetamide deacetylase-like 4-like, partial [Ficedula albicollis] | 0.0 |
| pfu_aug2.0_40.1_00113.t1 | gi|733918734|ref|XP_010721232.1| | PREDICTED: arylacetamide deacetylase-like 4 [Meleagris gallopavo] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_40.1_00113.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_40.1_00113.t1 atgataacgagagggttaatggtgctgtctatggctgtcctaccagtggcttactacctgtatacccccatgccaccaca atgtaaggagcccaatagacagcgagtcatagtggccatgagcaagattataaatctattgaacagatttctagacgtaa ccaaagtaggatcacatgccagtggatggagggcagtttttaatatttcaacaaaagagagtgatccaatgcttgagata gaggatgagcaatttgatggtgtaccatgtttatttcagatagaggatgtacagtttgatgaggatgtacagtttgatgg tgtacctatagaggatgtacagtttgatggtgtacctgtacgtatatataagagagtcgacagaggacaggaacttacag ctggcgccatctatattcacggaggtggatttgtgtttggcagtagagacacccatgattctccagtgagaaaaatagct ctctccactgatccatatctcactgtgtcctctatagagtaccgtctggctccagaataccggtacccagcagcatttga tgattgttactcagcgaccaaacatttcctaacacatgccaaagaccatggagtggatccaaaaagaattgctttaattg gtgatagtgcaggaggggccttggtggcagctgtcattaataagttgatctctgagaatgtccagcctagaccctccctc caggtcctcatataccccaccctccagggacttaacttcagaaccccatcttacttagctcatgatggaacaaaaaatag aggaatgctcactgcatatcccatggtgtgcttttggctggagtatgcctttggcacatgtgagaatgccagtttgtatc tccagaatactcatgtttctgaccatatgaggcagtcctacccatacttattctcaagtagattagacagtgaagaaata cagaccaaacctgtaaatgaaaatcttccaagagacattgaggaaagtgttaacaggatatttctcagcccatattattc tcctttactggcatcagatgatatactcaagaatattcccaagacgtttatctcaacatgtgattttgatcctctaaggg atgaggcagagtattacgcagaaagactgaaaaagttgggcattcctcatcttcataaacattaccatggttacgatcat ggaattttcgctgtagaattttataaaggatcggcagtgattcaagctgatgttatgaacttcattaaagaaaatttata g |
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Protein
| Protein ID | pfu_aug2.0_40.1_00113.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_40.1_00113.t1 MITRGLMVLSMAVLPVAYYLYTPMPPQCKEPNRQRVIVAMSKIINLLNRFLDVTKVGSHASGWRAVFNISTKESDPMLEI EDEQFDGVPCLFQIEDVQFDEDVQFDGVPIEDVQFDGVPVRIYKRVDRGQELTAGAIYIHGGGFVFGSRDTHDSPVRKIA LSTDPYLTVSSIEYRLAPEYRYPAAFDDCYSATKHFLTHAKDHGVDPKRIALIGDSAGGALVAAVINKLISENVQPRPSL QVLIYPTLQGLNFRTPSYLAHDGTKNRGMLTAYPMVCFWLEYAFGTCENASLYLQNTHVSDHMRQSYPYLFSSRLDSEEI QTKPVNENLPRDIEESVNRIFLSPYYSPLLASDDILKNIPKTFISTCDFDPLRDEAEYYAERLKKLGIPHLHKHYHGYDH GIFAVEFYKGSAVIQADVMNFIKENL |
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