Gene
| Gene Model ID | pfu_aug2.0_40.1_00116 |
|---|---|
| Locus | scaffold40.1 : 582720 ... 586143 : + |
| To GenomeBrowser | scaffold40.1:582720..586143 |
| Genes list of scaffold | scaffold40.1 |
| Synonym | pfu_aug1.0_10043.1_68136 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| lysosomal alpha-mannosidase-like | GO:0004559 GO:0005975 GO:0015926 GO:0044699 GO:0046872 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_40.1_00116.t1 | 1 | 1 | Glyco_hydro_38 | 1 | 225 | 0.0 | 170.4 | 0.0 | 0.0 | 169.8 |
| pfu_aug2.0_40.1_00116.t1 | 1 | 1 | Alpha-mann_mid | 231 | 306 | 9.0e-22 | 77.0 | 4.0e-25 | 2.0e-21 | 75.9 |
| pfu_aug2.0_40.1_00116.t1 | 4 | 1 | Glyco_hydro_38C | 357 | 388 | 1.79997e-41 | 142.4 | 0.00079 | 3.9 | 6.1 |
| pfu_aug2.0_40.1_00116.t1 | 4 | 2 | Glyco_hydro_38C | 385 | 495 | 1.79997e-41 | 142.4 | 7.4e-18 | 3.6e-14 | 52.4 |
| pfu_aug2.0_40.1_00116.t1 | 4 | 3 | Glyco_hydro_38C | 497 | 556 | 1.79997e-41 | 142.4 | 7.1e-20 | 3.5e-16 | 59.0 |
| pfu_aug2.0_40.1_00116.t1 | 4 | 4 | Glyco_hydro_38C | 561 | 674 | 1.79997e-41 | 142.4 | 1.8e-08 | 8.8e-05 | 21.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_40.1_00116.t1 | gi|573887677|ref|XP_006631611.1| | PREDICTED: lysosomal alpha-mannosidase-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_40.1_00116.t1 | gi|586489529|ref|XP_006875234.1| | PREDICTED: lysosomal alpha-mannosidase-like [Chrysochloris asiatica] | 0.0 |
| pfu_aug2.0_40.1_00116.t1 | gi|2345045|gb|AAC48763.1| | lysosomal alpha-mannosidase [Bos taurus] | 0.0 |
| pfu_aug2.0_40.1_00116.t1 | gi|725601781|ref|XP_010327778.1| | PREDICTED: lysosomal alpha-mannosidase isoform X4 [Saimiri boliviensis boliviensis] | 0.0 |
| pfu_aug2.0_40.1_00116.t1 | gi|383857929|ref|XP_003704456.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_40.1_00116.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_40.1_00116.t1 atggacgatgaagcatctacacattataatgccataattgacgaacataccctaggctttgaattcctacgggacaattt tggagaatgtggtagacctagagtagcttggcaaatagatccgtttggtcacagtagggagcatgcctctctgtttgcta gaatgggatttgatgggttgttctttggaagactagattatcaggataaagaagaaagaatgaaaacaaagacgatggag atgatttggcaaggaagccccaaaaatctgggaagtcagagtgatttatttactggagttctttacaatgggtacggacc accagggggattctgttttgatgtgaaatgtcacgaggatccaatcatggacgaccctaatctccatgatttcaatgttc agcagaaagtgtctagctttatcaatgccaccttaacatgggctgagagctacgctaccgagcatgttctgatgacaatg ggtggagatttcaactacgagaacgcaaacatgtggtacaaaaatttagataaattgatgtataacattaaccgagaaca cgcgcaaggaggaaacatcaacctattatactcgacaccttcttgctatctgaatcaagtgaataaagctaatcttacat ggccatctaagcaggatgatttcttcccgtatgcatcttcaccccatactttctggtcaggatactttacaagcagacca gcactgaagcattatgtccgacaaagtaataatttcttacaggcttgtaaacacttgaatgcatttgcatctctatttgg accaacaaacagcaatggaattcgggtactgaaagaagcgatgggcgttgcgcagcatcatgacgcagtttccggtacag agaaacaagctgttgcagacgattacgcgttaagactatacaaaggagtaaatgcttgtcagagtgttttagaaaatgca tacaaaaccttgttacaaacagacaaaaatgtcaatttcccggaacaatcattctgtgatctactgaacatcagtaggtg caatcttacagaagggaacgaacaattcactgtcaatgtctacaatcctttggctcgggaagtatctcattggattaaat tacctactaatgcaaaatcttgtgttgtaaccgacccttttggaagcttgaaggtactaaagaacttacaaagtggcgca actgctcaagttgaccatcggatgcagtactatatcagccattatggaaacaccacaaggccaaagtttcagggttctgg ggcctatgtgttcagaccaaatcagtctgagccgatggactttcagcacctctttcaaatacaaaccaaatttcttcaag gtcagctagttcaagaagttcgtcaacagtttagtccttgggtatcaactgtaacaagactgtacaatggggcagcatac ttggagactgaatggaccgtaggaccaatacctaccaaagatggaatcgaaccagtggctggaaattacttcccggtgaa tagtagaatctacttacaagatgtaaagaaggatgtgcagctaacagtactgacggatcgcagtcaaggaggtagcagta tccaggacggatgcctggagctgatggtacacagaagacttacaacagacgatttctttggtgcaggagaggctctgaat gagaaggggtcagataaccaaggattggttgtgcgtgaacacatttacgagaaagaagagagtaaagtactttccaaccc cgctaaagtctcattgaggaatatcttcaagggatatgaagttgtatcggctaaagaactaactcttggtgctaaccttg accttaatgaattacacaggttgccatggcaatataagtcaacatatgacgaagacagcgatagaagtaatttgaattct gatgcaaagataatgaggaaatcacagtcttttccaaactttaacgaatatttattggacaatttaacgattatactcaa tccaatggagataaagacattccagatagcgataacaaatagtggttga |
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Protein
| Protein ID | pfu_aug2.0_40.1_00116.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_40.1_00116.t1 MDDEASTHYNAIIDEHTLGFEFLRDNFGECGRPRVAWQIDPFGHSREHASLFARMGFDGLFFGRLDYQDKEERMKTKTME MIWQGSPKNLGSQSDLFTGVLYNGYGPPGGFCFDVKCHEDPIMDDPNLHDFNVQQKVSSFINATLTWAESYATEHVLMTM GGDFNYENANMWYKNLDKLMYNINREHAQGGNINLLYSTPSCYLNQVNKANLTWPSKQDDFFPYASSPHTFWSGYFTSRP ALKHYVRQSNNFLQACKHLNAFASLFGPTNSNGIRVLKEAMGVAQHHDAVSGTEKQAVADDYALRLYKGVNACQSVLENA YKTLLQTDKNVNFPEQSFCDLLNISRCNLTEGNEQFTVNVYNPLAREVSHWIKLPTNAKSCVVTDPFGSLKVLKNLQSGA TAQVDHRMQYYISHYGNTTRPKFQGSGAYVFRPNQSEPMDFQHLFQIQTKFLQGQLVQEVRQQFSPWVSTVTRLYNGAAY LETEWTVGPIPTKDGIEPVAGNYFPVNSRIYLQDVKKDVQLTVLTDRSQGGSSIQDGCLELMVHRRLTTDDFFGAGEALN EKGSDNQGLVVREHIYEKEESKVLSNPAKVSLRNIFKGYEVVSAKELTLGANLDLNELHRLPWQYKSTYDEDSDRSNLNS DAKIMRKSQSFPNFNEYLLDNLTIILNPMEIKTFQIAITNSG |
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