Gene
| Gene Model ID | pfu_aug2.0_400.1_00690 |
|---|---|
| Locus | scaffold400.1 : 18127 ... 36655 : - |
| To GenomeBrowser | scaffold400.1:18127..36655 |
| Genes list of scaffold | scaffold400.1 |
| Synonym | pfu_aug1.0_12081.1_24986 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_400.1_00690.t1 | 5 | 1 | DOMON | 22 | 47 | 0.0 | 157.6 | 1.4 | 4300.0 | -2.5 |
| pfu_aug2.0_400.1_00690.t1 | 5 | 2 | DOMON | 184 | 217 | 0.0 | 157.6 | 0.0035 | 10.0 | 6.0 |
| pfu_aug2.0_400.1_00690.t1 | 4 | 1 | Trypan_PARP | 234 | 296 | 3.0e-07 | 30.3 | 0.00011 | 0.34 | 10.7 |
| pfu_aug2.0_400.1_00690.t1 | 4 | 2 | Trypan_PARP | 279 | 339 | 3.0e-07 | 30.3 | 0.00053 | 1.6 | 8.5 |
| pfu_aug2.0_400.1_00690.t1 | 5 | 3 | DOMON | 362 | 480 | 0.0 | 157.6 | 3.7e-24 | 1.1e-20 | 73.8 |
| pfu_aug2.0_400.1_00690.t1 | 4 | 3 | Trypan_PARP | 515 | 534 | 3.0e-07 | 30.3 | 0.02 | 60.0 | 3.4 |
| pfu_aug2.0_400.1_00690.t1 | 5 | 4 | DOMON | 555 | 610 | 0.0 | 157.6 | 7.0e-14 | 2.1e-10 | 40.6 |
| pfu_aug2.0_400.1_00690.t1 | 4 | 4 | Trypan_PARP | 640 | 715 | 3.0e-07 | 30.3 | 1.6e-09 | 4.8e-06 | 26.4 |
| pfu_aug2.0_400.1_00690.t1 | 5 | 5 | DOMON | 721 | 783 | 0.0 | 157.6 | 4.5e-14 | 1.3e-10 | 41.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_400.1_00690.t1 | gi|676421163|ref|XP_009043781.1| | hypothetical protein LOTGIDRAFT_152053 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_400.1_00690.t1 | gi|512936725|ref|XP_004933588.1| | 0.0 | |
| pfu_aug2.0_400.1_00690.t1 | gi|194757120|ref|XP_001960813.1| | GF13555 [Drosophila ananassae] | 0.0 |
| pfu_aug2.0_400.1_00690.t1 | gi|195426379|ref|XP_002061312.1| | GK20794 [Drosophila willistoni] | 0.0 |
| pfu_aug2.0_400.1_00690.t1 | gi|170027877|ref|XP_001841823.1| | conserved hypothetical protein [Culex quinquefasciatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_400.1_00690.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_400.1_00690.t1 atgccagaacgtgattgcgataacaaaggtactggtaacactcccgtaatatccaatgaaaatgaagtcactgacagcgt cagttctcaacccaaacaggcctctgttttggataaagaagtcaagaacatctcaaatgaggacaacagttacacgtctg actcggattctgatggcagtcttgtggatccagttcccaacaaccgtaaacttgtaccccaaaagacaagacaatttaca acaatagtaaatatacatgtatttattacaggacaagacacttcagaattttgtagtggtcattcataccagaatggaca gtgtgtttgtacaaaaccatatgtaggatctagatgtcagtataaagaggattgttttgatgatggtgactgtggtaacc atggtaactgtatcgacaccggtgccacgtattaccctaaacaccaatgtttctgtgacgctggatggttcggtatccac tgtgagaaagcgtcccctgtcaataccactaacattgattactccctctacacgtccactaacgtatctgatgaatacca gctatcatacagaattctcctgattgagaatgagcttgaagttgtattgaaggtgaagacagagacctgggttggacttg gatggcgtcctagcagtttacgttctgagtgccagaacttcccagctctaccaggagacaatacaccaacctcaccacga ccaaccagtgaaccagaaaacacacctgaaccaactggtgaaccagagaacacgccagaacctacaggtgaaccagaaaa tacacctgaaccaactggtgaaccagagaacacgccagaacctacaggtgaaccagaaaatacacctgaaccaactagtg aaccagaaaacacacctgaaccaaccagtgaaccagaaaacacacctgaacccaccaaaaacacacctgaacccaccagt gaaccagaaaacacacctgaacccaccagtgaaccagaaaacacacctcagccatccagcatatcgcctatgaatcattc ctgcaccaatgtgttaacactttgtctttatgggggtccaccttgtgagtattggactatgttagagtatgattccactc atatcacaatacatctcgctgccagtataagtacatcacagtatgtggccatcggattctcggagactccctctatggac aatagtgatgtgtatgtggcttatatgaacacacaacagcagattattgtagaggacagaaatgttggggcgtataaagt aatgcctggcatggatgctacacagaatgttatgagtaaagcgggtaactactccaatggctacctgagcgtcaagttta aacgtcagcgtaacaccatggacagtacagatgccttacttacagacggacagtgtcgccacatactgatggcgtgggga gggagtgtatctacgtcaggggtgataggatatcatatgtcaaatagaaattatactgcccagaaagtctgcttccaaac atgtggaggcgccacactgcaccctgagcctacgcctacaaccagcagccctacccctgctccagagaccacacccaatc ctcaccagctgtcggcgtgtacagggatgtggaagagctgtagtaacagtgatgcgtccatgtgtccatacactgcaagc tggatgtacgatgtctccacagataccgttacattcactgtatctgccaccataacaaccaatcagtggtttgctatcgg attctctaatgatacacaaatgccaaatagcgatgtttactttggagcgtacagcagtacgtcaatgggtatagttgtga cagatagtttatttttgttatttaaatcttccatctgtctaagatcaacagtaaatattatacccaaaatgttgaaagaa caaacaccagaaccaacatctgaaccagaacaaacaccagaaccaacatctgaaccagaacaaacaccagaaccaacttc tgaaccagaacaaacaccagaaccaacttctgaacctggacagacaccggaaccaacttctgaaccaggacagacaccgg aaccaacatcagaacctgagggggaaggaggtccagggggctgtggttctcggccagtacttccaggagccatcccacat gctatggattgtacagacatgataattggttcagcgcgggggatgaggagtcgtataggagattactattctcgggatag atcgacacccctccatgatgaagcttatggtggaacacagagtttgactgctgctgtgggatttgaagaggatggatata ctactatactgttcaggaagaaattacaagatattagacattatggttttaattgtgataatctacttatgctgtggagt gatatgtgtataagaagtacgtattataaacacaatatgtaa |
|
Protein
| Protein ID | pfu_aug2.0_400.1_00690.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_400.1_00690.t1 MPERDCDNKGTGNTPVISNENEVTDSVSSQPKQASVLDKEVKNISNEDNSYTSDSDSDGSLVDPVPNNRKLVPQKTRQFT TIVNIHVFITGQDTSEFCSGHSYQNGQCVCTKPYVGSRCQYKEDCFDDGDCGNHGNCIDTGATYYPKHQCFCDAGWFGIH CEKASPVNTTNIDYSLYTSTNVSDEYQLSYRILLIENELEVVLKVKTETWVGLGWRPSSLRSECQNFPALPGDNTPTSPR PTSEPENTPEPTGEPENTPEPTGEPENTPEPTGEPENTPEPTGEPENTPEPTSEPENTPEPTSEPENTPEPTKNTPEPTS EPENTPEPTSEPENTPQPSSISPMNHSCTNVLTLCLYGGPPCEYWTMLEYDSTHITIHLAASISTSQYVAIGFSETPSMD NSDVYVAYMNTQQQIIVEDRNVGAYKVMPGMDATQNVMSKAGNYSNGYLSVKFKRQRNTMDSTDALLTDGQCRHILMAWG GSVSTSGVIGYHMSNRNYTAQKVCFQTCGGATLHPEPTPTTSSPTPAPETTPNPHQLSACTGMWKSCSNSDASMCPYTAS WMYDVSTDTVTFTVSATITTNQWFAIGFSNDTQMPNSDVYFGAYSSTSMGIVVTDSLFLLFKSSICLRSTVNIIPKMLKE QTPEPTSEPEQTPEPTSEPEQTPEPTSEPEQTPEPTSEPGQTPEPTSEPGQTPEPTSEPEGEGGPGGCGSRPVLPGAIPH AMDCTDMIIGSARGMRSRIGDYYSRDRSTPLHDEAYGGTQSLTAAVGFEEDGYTTILFRKKLQDIRHYGFNCDNLLMLWS DMCIRSTYYKHNM |
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