Gene
| Gene Model ID | pfu_aug2.0_400.1_00702 |
|---|---|
| Locus | scaffold400.1 : 227242 ... 243446 : - |
| To GenomeBrowser | scaffold400.1:227242..243446 |
| Genes list of scaffold | scaffold400.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_400.1_00702.t1 | 1 | 1 | Rhomboid | 164 | 288 | 1.2e-25 | 90.2 | 6.6e-29 | 2.0e-25 | 89.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_400.1_00702.t1 | gi|676426074|ref|XP_009044507.1| | hypothetical protein LOTGIDRAFT_230044 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_400.1_00702.t1 | gi|524872596|ref|XP_005093059.1| | PREDICTED: rhomboid-related protein 2-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_400.1_00702.t1 | gi|684411492|ref|XP_009176410.1| | hypothetical protein T265_11479 [Opisthorchis viverrini] | 0.0 |
| pfu_aug2.0_400.1_00702.t1 | gi|676425996|ref|XP_009044482.1| | hypothetical protein LOTGIDRAFT_230028 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_400.1_00702.t1 | gi|675854890|ref|XP_009013005.1| | hypothetical protein HELRODRAFT_109972 [Helobdella robusta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_400.1_00702.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_400.1_00702.t1 atgtcaacgggtagtcgcgagagaaggagaatgacacgagaggagatggtgcaggaagacaagatgaggagggagctaga acagaaattcaaaccagtgtttgctaagcatggtaaacatggcgttcctctcaaagaccttaaacaggaactggaagagg agggacttacagattatataccgcctgaccgtatccgagaactggtcagtaaggcagacactgacggagataaacagata aaactcggagaatttgtacgcttgatgatgggagaggagattacggctaaggagcgtaccaggatgggtaaagtgatggg tgcggcaatagctaacatagtcccccgtagtcagagggaagatttcctggctaactataactgtaaaccacctcctatct tcatgatctttgtcagtgtcgtagaaggcgtggccactacagctacggcaggggtacccacctacagtccacttatatac aaccctaaacggagatatgaagcatggaaatttattacgtataagttattacatcaagggtacattcatctgataaccaa cctgattttccagttgatattaggccttcctttagaacttgttcacaaattttggcgtgtgttcatcatctacattcttg gtgtaatagcagggtccctcgctcattctgtaacagatcattctgtatatctatgtggtgctagtgggggatgctatgcc ttgattggaggtcacttagcctctgtaattgttaactggaaagagatgaattacaagtgttgtgatggatcaatagccag attcattctaagtgctccagtcagactgactgttttcttggtgctagctatgttagtaatctggctccatgttaccagct gtgttagtaatctggctccatgttaccagctatgttag |
|
Protein
| Protein ID | pfu_aug2.0_400.1_00702.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_400.1_00702.t1 MSTGSRERRRMTREEMVQEDKMRRELEQKFKPVFAKHGKHGVPLKDLKQELEEEGLTDYIPPDRIRELVSKADTDGDKQI KLGEFVRLMMGEEITAKERTRMGKVMGAAIANIVPRSQREDFLANYNCKPPPIFMIFVSVVEGVATTATAGVPTYSPLIY NPKRRYEAWKFITYKLLHQGYIHLITNLIFQLILGLPLELVHKFWRVFIIYILGVIAGSLAHSVTDHSVYLCGASGGCYA LIGGHLASVIVNWKEMNYKCCDGSIARFILSAPVRLTVFLVLAMLVIWLHVTSCVSNLAPCYQLC |
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