Gene
| Gene Model ID | pfu_aug2.0_400.1_00706 |
|---|---|
| Locus | scaffold400.1 : 268397 ... 299528 : + |
| To GenomeBrowser | scaffold400.1:268397..299528 |
| Genes list of scaffold | scaffold400.1 |
| Synonym | pfu_aug1.0_30445.1_26527 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| beta-hexosaminidase subunit beta | GO:0004553 GO:0005975 GO:0019953 GO:0043170 GO:0043227 GO:0044255 GO:0044702 GO:0048609 GO:0048731 GO:0048869 GO:0050794 GO:0050877 GO:0065008 GO:1901135 GO:1901564 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_400.1_00706.t1 | 2 | 1 | Glyco_hydro_20 | 153 | 456 | 0.0 | 260.1 | 0.0 | 0.0 | 257.4 |
| pfu_aug2.0_400.1_00706.t1 | 2 | 2 | Glyco_hydro_20 | 474 | 491 | 0.0 | 260.1 | 0.019 | 36.0 | 3.3 |
| pfu_aug2.0_400.1_00706.t1 | 2 | 1 | Acyl_transf_3 | 803 | 991 | 1.6e-08 | 33.7 | 9.0e-09 | 1.7e-05 | 23.8 |
| pfu_aug2.0_400.1_00706.t1 | 1 | 1 | PAX | 997 | 1053 | 6.1e-11 | 42.1 | 7.1e-14 | 1.3e-10 | 41.0 |
| pfu_aug2.0_400.1_00706.t1 | 1 | 1 | DDE_3 | 1093 | 1240 | 3.7e-17 | 62.4 | 4.4e-20 | 8.1e-17 | 61.3 |
| pfu_aug2.0_400.1_00706.t1 | 2 | 2 | Acyl_transf_3 | 1273 | 1402 | 1.6e-08 | 33.7 | 3.8e-06 | 0.0071 | 15.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_400.1_00706.t1 | gi|676495411|ref|XP_009066883.1| | hypothetical protein LOTGIDRAFT_223285 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_400.1_00706.t1 | gi|260813663|ref|XP_002601536.1| | hypothetical protein BRAFLDRAFT_230606 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_400.1_00706.t1 | gi|391345238|ref|XP_003746897.1| | PREDICTED: beta-hexosaminidase subunit beta-like [Metaseiulus occidentalis] | 0.0 |
| pfu_aug2.0_400.1_00706.t1 | gi|697522053|ref|XP_009686822.1| | PREDICTED: beta-hexosaminidase subunit beta [Struthio camelus australis] | 0.0 |
| pfu_aug2.0_400.1_00706.t1 | gi|676463628|ref|XP_009056657.1| | hypothetical protein LOTGIDRAFT_190462 [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_400.1_00706.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_400.1_00706.t1 atgtcgggaactagacataattttactgaggaaaaagactctcgaacaagtcataatgttcttcataatgcaaaaaaaag aggggctaaacagagtaattatcatttcatccgacaccgattttactttttaatattatattactggcacacattatcaa gaagtggtattgaagaaatatggataaagtcatacacaaaacccgagctcagattccaaaaacgaaaagtatcggcaaaa tacgtttactaccaattcacatttgctctacaagagctggatatggggtcagtggcggcaccaggtgcaccatggcctca tcccaagaagtggatccaggactccgaggttatcacactgaacgtacggaatataaacatcgtccacagtttaccaagct gtgacatacttgaggaggcagcaaataggtacagggagataattcagctttatgatgacgccatgtcatataacaaactc aatgtcttccattggcacatcgtggacgaccaatcattcccttacgaaagtgtcacctttcctgaattatcaaagaaggg cgcatacagtcccgtacatgtgtacagtcaggcagatgtagcggaaattatcgagtatgcccgactaagaggtattcggg tgattccagaattcgatactcctggacacacccaatcatggggaaagtctcacaaagaacttctaacaccatgctgggtg aatagtactattggaagggcgttaccaaattatcacggagcgtatgaaatcttcaatccgatgctggacacaacgttcac cttcctacgggatttcctgacagaaataaggaaaacattccctgaccagtatgttcacttaggaatggacgaggcctacc catactgttggcagtccagtccaaacgtcaccgagttcatggaaaagaacaacatgactgagtactcagaactagaggaa tattacacgaataaagtgttgaacgtggccaaggaggtgaattatagctacgtcatatggcaggaaccgatagaacacgg cgtgaaggccaagccagacaccattgtggaagtatggaagggcggacgggcagtggagactaactgggcggagtacatgg caaatattactcaactcggatacaagacaattctatcctcttgttggtatctgaattacatctcatacggccaggattgg agaaaatattacgaatgtgaacctcacagcttcataggatctgaagaacagaaggagagggtgataggaggagaggcgtg tatatggacagagtacgtggatgggacgaatatcctctccagattgtggccacgtgcgtcggctacagcagaaagactat ggagtccccgtgacgtcaatcacacagaagacgccaagtaccgacttgaccagcaaagatgtagaatgttaaggccacgt gcgtcggctacagcagaaagactatggagtcctcgtgacgtcaataacacagagaacgcaaagtaccgacttgatcagca aagatgtagaatgttaagacgtggtataccggcagagcctatactggacggttattgtggggactacgaagccggaatgg gacctcataaacacgtgcaatcttacacaggtcacacacattacacagatctaacacaaaacacagctcaaacacatgta gactgtgaagggaacgatttaaattcaaagacaggagaagataacacatgtcatgaccacagtgctcttataatacaagg tcttggacagaaggatagatgggccgaacaaatgatagatgcagcaggtaagccacagtcaaggctcctggagggaaatc tggtctggtatggagcgtatgatgagtgtaaaaaggtcaaagccatgtacagtaaggacaatctgaccgctccaagacag gtgttcagtgggcagtattgtgtagcttcgtttccactaactgctgtagcagctcaaaatcccagcaaaatattctttca tgatgctttgaaaaaagaactttgtcgaattcatatttttccaggacttgggagagaggacaccttccataatgatagcc ttgtgtttaccaagtacttgtacagattcacacatcaacgaagcactgttgaaatggtggtttttggtacacttgcctta ctagctgttatagccactgtgtacgatctagttatacagtgtacagaaccaaagacaacggaaaagaactcgctctttga accatctatcgacgaaaaaacacatttgattggcgaaatcaaaaagataaatgatgaacaaagtcttcaaaggggacaag gtacgctatccagacttctactttcgttttccatgtattctaatgctaaaaagctgatgagtaccaagcagacggccggt agtttgaccgccattaacggcatacgggccatcagtatatcatgggttgttttaggacacaccttcatcttcgtcattac attctcatcaaattttaatgtttggctgccagagatgttacaaagatgtggccttttattggcatatctgactttgaaag aactggaaaagagagacggaaaattaaacatacctatgttttactttcacagattttggagactaacaccagcgtacatg ttgttgctcctgtttgacgtgggtttattgaagtacctgggtgacggaccgttctggccgaggcagggattcgaagccaa tcagtgtaaaaacaactggtggtggaacctgctgtatcttaataacttcctggataatggaaatcctagttgctttgcct ggggatggtaccttgcaaatgacatgcagttctttttgatatcacctctcttccttctaccattgtaccataatgaggtg ttaggagtaatactttgctgtctgtcggtggtaggtacatgggtcgcgactggtatactatctacacactatggtatgcc accatcattatttggaggagggggaactaagggtaaacccaggagtgttagctctgacgaagttgtttccttcatagaat atatgaagaagaaatctccttcaatacaaataaaggaaattcgagcaaaactgctagaacatgggatatgtaccgaaaat gaattgccatccattacaacaataagtagaattattcgggattatctcggcatgacgcgcaagattatggaacaagtacc tcatgagacaacatcggatcaccatgatacacttgttaataattatatgagttctattttgacctacaagccagaacaaa ttcattttttcgacgagtgctcggtggtccgtacctctggtaatagaagatacggtcattcgttgtcgggtgaacgcgca gtagaggtgcagagatatgcaagcaatgcaaagtacacactgaacttgctttgcaatattttcgaaatagggcacttcga aatcatagagggtgcttcaaatgctttagaaatgctcgattttttccagcgttccgttcatgagaagaactcgatgggca accctatctttaaccgtggggatgttgtcgtcatggacaactgcggcttccatcaccatagggtatacgaagggcgactg cgcaatttacttaaccagattggagtagaattagtgttccagcccccgtactcaccggaacttaatgcttgtgaatatgt gttccatttaatgaaagaaaaattgcgtcaaaattcggagtttacatatgactacaccgaattggccataacacgagctc tgactaaagttgagtctagatcaataagccaaatttatcgaaaatgcggatattacctcaacctgttaacatgggccgtg gccacagctttagcggtgaccattctgtacggcttacgtgaccctatagtggtaagtccgatgtccactcaagtctcggc tctctacaataccacacaccggacagtatggggcgcatgcgtgtgctgggtcatctttgcttgcgctacaggaaatggag gttttataaacacgttactatcatggaggacatttggaccatttgccaggatgtcatactgtatataccttatacatcct ttggtgatgtacctgtactacggtaatctcagagaaatgatctacttagcagacctttcagggatttacctgttcctggg taacctagtggcatcgtgcatggctgcatttgtggcgtcactcctgtttgaagcgcccatgttaggactggagaaagtcg ccttccggaggggacacaaatag |
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Protein
| Protein ID | pfu_aug2.0_400.1_00706.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_400.1_00706.t1 MSGTRHNFTEEKDSRTSHNVLHNAKKRGAKQSNYHFIRHRFYFLILYYWHTLSRSGIEEIWIKSYTKPELRFQKRKVSAK YVYYQFTFALQELDMGSVAAPGAPWPHPKKWIQDSEVITLNVRNINIVHSLPSCDILEEAANRYREIIQLYDDAMSYNKL NVFHWHIVDDQSFPYESVTFPELSKKGAYSPVHVYSQADVAEIIEYARLRGIRVIPEFDTPGHTQSWGKSHKELLTPCWV NSTIGRALPNYHGAYEIFNPMLDTTFTFLRDFLTEIRKTFPDQYVHLGMDEAYPYCWQSSPNVTEFMEKNNMTEYSELEE YYTNKVLNVAKEVNYSYVIWQEPIEHGVKAKPDTIVEVWKGGRAVETNWAEYMANITQLGYKTILSSCWYLNYISYGQDW RKYYECEPHSFIGSEEQKERVIGGEACIWTEYVDGTNILSRLWPRASATAERLWSPRDVNHTEDAKYRLDQQRCRMLRPR ASATAERLWSPRDVNNTENAKYRLDQQRCRMLRRGIPAEPILDGYCGDYEAGMGPHKHVQSYTGHTHYTDLTQNTAQTHV DCEGNDLNSKTGEDNTCHDHSALIIQGLGQKDRWAEQMIDAAGKPQSRLLEGNLVWYGAYDECKKVKAMYSKDNLTAPRQ VFSGQYCVASFPLTAVAAQNPSKIFFHDALKKELCRIHIFPGLGREDTFHNDSLVFTKYLYRFTHQRSTVEMVVFGTLAL LAVIATVYDLVIQCTEPKTTEKNSLFEPSIDEKTHLIGEIKKINDEQSLQRGQGTLSRLLLSFSMYSNAKKLMSTKQTAG SLTAINGIRAISISWVVLGHTFIFVITFSSNFNVWLPEMLQRCGLLLAYLTLKELEKRDGKLNIPMFYFHRFWRLTPAYM LLLLFDVGLLKYLGDGPFWPRQGFEANQCKNNWWWNLLYLNNFLDNGNPSCFAWGWYLANDMQFFLISPLFLLPLYHNEV LGVILCCLSVVGTWVATGILSTHYGMPPSLFGGGGTKGKPRSVSSDEVVSFIEYMKKKSPSIQIKEIRAKLLEHGICTEN ELPSITTISRIIRDYLGMTRKIMEQVPHETTSDHHDTLVNNYMSSILTYKPEQIHFFDECSVVRTSGNRRYGHSLSGERA VEVQRYASNAKYTLNLLCNIFEIGHFEIIEGASNALEMLDFFQRSVHEKNSMGNPIFNRGDVVVMDNCGFHHHRVYEGRL RNLLNQIGVELVFQPPYSPELNACEYVFHLMKEKLRQNSEFTYDYTELAITRALTKVESRSISQIYRKCGYYLNLLTWAV ATALAVTILYGLRDPIVVSPMSTQVSALYNTTHRTVWGACVCWVIFACATGNGGFINTLLSWRTFGPFARMSYCIYLIHP LVMYLYYGNLREMIYLADLSGIYLFLGNLVASCMAAFVASLLFEAPMLGLEKVAFRRGHK |
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