Gene
| Gene Model ID | pfu_aug2.0_4005.1_19242 |
|---|---|
| Locus | scaffold4005.1 : 36366 ... 49623 : + |
| To GenomeBrowser | scaffold4005.1:36366..49623 |
| Genes list of scaffold | scaffold4005.1 |
| Synonym | pfu_aug1.0_7225.1_17074 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4005.1_19242.t1 | 1 | 1 | DUF3504 | 145 | 250 | 1.7e-09 | 37.6 | 3.1e-13 | 4.6e-09 | 36.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4005.1_19242.t1 | gi|514460525|ref|XP_003469588.2| | PREDICTED: scavenger receptor class F member 1 [Cavia porcellus] | 7.0e-27 |
Transcript
| Transcript ID | pfu_aug2.0_4005.1_19242.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4005.1_19242.t1 atggctaattttgagataggttccattaatgaaatactgaatttacaacctatggagaatcaagataaggaatgggatct tctctccaaaattctaaatgatgatatggtcatggaggtcacagatgtttcatgcagtactgtaaatgaagaagccctca gagagatggacaaggcactggaggctgcaaacccagtaactttcccagttccatatcaagatgttaaacaaaagcgtttt aaatccatttccgaggaagaactgaatgaacttcaggcaacaaacagtcaaaatcaactaagaaaaacactaaatggtca atttcagtgttcaagatatgcaaatgacgttctagaggtcaaactgaaacagaacctgcgtaatggagtatctcgtccta caaaacataaagatgtaatacatgcttcagatcttcagaaaatttcttcgttcctaggaaatgaaaatcccgccaaactg cgatataaggtttggtacgacttgggactccactttgttacacgaggtttggagtttcacgaacaactcaacacttcttc atttgactttcacgttgatgaaaatggccgcgagtatgctattctcaaccatgagacgaaggaaaagacccgtcaaggag ggctcgatgccagggaggatttcgcggataagcgaatgtacgctacaaatacagaaaaatgtcccgtcggattacttaag ctactgctttccaaaacatcttcagaggccgtaagcttgttcaatcactgcttcaaggatgcattgaaaagtccttcata tgtacgacagtacgacatatggttcatcagcaaatctgtgaaacagttcatgaatgaaatatccaagcatgccgaatgtt gttgtcctaaaagtacatacggtaataattgctcccaaaaatgtccagtaaactgcttaaatgaaacttgtgatcctgat actggtatttgctggaatggctgtgaaagtggatggataggagacgaatgcaaagaaacatgccatgattattattacgg ttataactgtagtcaaagatgtcatgattgtaaggacaatgtcacatgtcaccatgtcaatggaacatgcctggatggat gtatggacggttacactagccataagtgcgatagagcctgtgaaaatggaacatacagctataactgcaacacaacttgt ggtaactgtagaaacagtgcaatatgtgacagggaatctggtaattgtcctggaaatgactgtgaagacggttttaaggg acctagttgtaaggatgaatgtggtaccggtgaatacgggcaaaactgtaaagagaaatgtgggtcctgcaaagatgaag tcacgtgtaacagcgtgaatggtacctgcacaaatggctgtaaagacggatatctttgggatgattgtaaaagag |
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Protein
| Protein ID | pfu_aug2.0_4005.1_19242.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4005.1_19242.t1 MANFEIGSINEILNLQPMENQDKEWDLLSKILNDDMVMEVTDVSCSTVNEEALREMDKALEAANPVTFPVPYQDVKQKRF KSISEEELNELQATNSQNQLRKTLNGQFQCSRYANDVLEVKLKQNLRNGVSRPTKHKDVIHASDLQKISSFLGNENPAKL RYKVWYDLGLHFVTRGLEFHEQLNTSSFDFHVDENGREYAILNHETKEKTRQGGLDAREDFADKRMYATNTEKCPVGLLK LLLSKTSSEAVSLFNHCFKDALKSPSYVRQYDIWFISKSVKQFMNEISKHAECCCPKSTYGNNCSQKCPVNCLNETCDPD TGICWNGCESGWIGDECKETCHDYYYGYNCSQRCHDCKDNVTCHHVNGTCLDGCMDGYTSHKCDRACENGTYSYNCNTTC GNCRNSAICDRESGNCPGNDCEDGFKGPSCKDECGTGEYGQNCKEKCGSCKDEVTCNSVNGTCTNGCKDGYLWDDCKR |
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