Gene
| Gene Model ID | pfu_aug2.0_401.1_04110 |
|---|---|
| Locus | scaffold401.1 : 162181 ... 167051 : + |
| To GenomeBrowser | scaffold401.1:162181..167051 |
| Genes list of scaffold | scaffold401.1 |
| Synonym | pfu_aug1.0_11790.1_39228 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| fucose mutarotase | GO:0006004 GO:0016857 GO:0036065 GO:0042806 GO:0045665 GO:0060180 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_401.1_04110.t1 | 1 | 1 | RbsD_FucU | 5 | 148 | 9.60002e-41 | 139.4 | 7.00649e-45 | 1.10001e-40 | 139.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_401.1_04110.t1 | gi|524889096|ref|XP_005101109.1| | PREDICTED: fucose mutarotase-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_401.1_04110.t1 | gi|676444025|ref|XP_009050293.1| | hypothetical protein LOTGIDRAFT_201494 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_401.1_04110.t1 | gi|260825905|ref|XP_002607906.1| | hypothetical protein BRAFLDRAFT_114228 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_401.1_04110.t1 | gi|124377998|ref|NP_081204.2| | fucose mutarotase isoform 1 [Mus musculus] | 0.0 |
| pfu_aug2.0_401.1_04110.t1 | gi|471368963|ref|XP_004375004.1| | PREDICTED: fucose mutarotase isoform X1 [Trichechus manatus latirostris] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_401.1_04110.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_401.1_04110.t1 atgcctctgaaaacaataccacgatgtttatctcctgatcttctacacactctggctgccatgggacatggagatgagat agtacttgctgatgcacactttcctacatcttcaatatgcagagagggaccaaaagaagttagagctgatggagtagata ttcctacactgttagatggcgtattacagttactacctctagaccagtatgttgaattgccggttgcactgatggaccca gtgccaagtgacaaggcagcaggcatagaaattccagtatggaaacaatatcgacagctcgttgataagcatgagggtga aaagacaaaaatcgagtatgtagaaagatttgccttctatgacagagcaaagaaagcatttgctgtagttcacacagggg aacttgcgaaatatggtaatataatcctgaagaaaggagttgcagtgtga |
|
Protein
| Protein ID | pfu_aug2.0_401.1_04110.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_401.1_04110.t1 MPLKTIPRCLSPDLLHTLAAMGHGDEIVLADAHFPTSSICREGPKEVRADGVDIPTLLDGVLQLLPLDQYVELPVALMDP VPSDKAAGIEIPVWKQYRQLVDKHEGEKTKIEYVERFAFYDRAKKAFAVVHTGELAKYGNIILKKGVAV |
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