Gene
| Gene Model ID | pfu_aug2.0_401.1_04112 |
|---|---|
| Locus | scaffold401.1 : 181491 ... 191286 : + |
| To GenomeBrowser | scaffold401.1:181491..191286 |
| Genes list of scaffold | scaffold401.1 |
| Synonym | pfu_aug1.0_6282.1_38307 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_401.1_04112.t1 | 1 | 1 | TM2 | 80 | 126 | 4.9e-12 | 45.8 | 4.9e-16 | 7.2e-12 | 45.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_401.1_04112.t1 | gi|242013799|ref|XP_002427588.1| | conserved hypothetical protein [Pediculus humanus corporis] | 0.0 |
| pfu_aug2.0_401.1_04112.t1 | gi|391348229|ref|XP_003748351.1| | PREDICTED: TM2 domain-containing protein CG11103-like [Metaseiulus occidentalis] | 0.0 |
| pfu_aug2.0_401.1_04112.t1 | gi|241854649|ref|XP_002415968.1| | conserved hypothetical protein [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_401.1_04112.t1 | gi|157127687|ref|XP_001655039.1| | AAEL010891-PA [Aedes aegypti] | 0.0 |
| pfu_aug2.0_401.1_04112.t1 | gi|328778232|ref|XP_391919.2| | PREDICTED: TM2 domain-containing protein CG11103-like [Apis mellifera] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_401.1_04112.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_401.1_04112.t1 atggacgaaaaccgttcccggagtccaatagaattcctaaactgcagtgaaccagtggatctgaatggtaatgaaactgc caagaaagaattaggacatggatgtctcaagtatggtggtgaaagatacgaggatgttgagctgacaggagtgatttgtg aagtactggagggcattgagtgttttggtaacaggaccttcgttaaggatggattcccttgtatcaagtacaatggccac tactttgtgacaacactgatttattctgtgcttcttggattccttggaatggacagattctgtctcggattgacgggtac agcagtcggcaaattactgacactaggtggcgttggtatctggtggattgtggacgtcgttttgttagttaacggaatgt taaaaccagaggacgacagtaattgggtgccatattactga |
|
Protein
| Protein ID | pfu_aug2.0_401.1_04112.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_401.1_04112.t1 MDENRSRSPIEFLNCSEPVDLNGNETAKKELGHGCLKYGGERYEDVELTGVICEVLEGIECFGNRTFVKDGFPCIKYNGH YFVTTLIYSVLLGFLGMDRFCLGLTGTAVGKLLTLGGVGIWWIVDVVLLVNGMLKPEDDSNWVPYY |
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