Gene
| Gene Model ID | pfu_aug2.0_401.1_04119 |
|---|---|
| Locus | scaffold401.1 : 318771 ... 319968 : + |
| To GenomeBrowser | scaffold401.1:318771..319968 |
| Genes list of scaffold | scaffold401.1 |
| Synonym | pfu_aug1.0_1638.1_00781 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_401.1_04119.t1 | 1 | 1 | AMP-binding | 34 | 254 | 1.0e-20 | 73.5 | 1.1e-23 | 8.3e-20 | 70.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_401.1_04119.t1 | gi|163846661|ref|YP_001634705.1| | 2.0e-10 | |
| pfu_aug2.0_401.1_04119.t1 | gi|156375372|ref|XP_001630055.1| | predicted protein [Nematostella vectensis] | 2.0e-10 |
Transcript
| Transcript ID | pfu_aug2.0_401.1_04119.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_401.1_04119.t1 atgtataaattctccaacaagaaaagaagttatttaagtacaccatggacccttaatacatcgtactgcacgattccaga gcggttacggctgattggaaagcagaacccagacaaagaagctctgatatttgtcggagaaaaacatagaacaagtgtta cctacaaagaggtagtggatggatccactattatttcgaggaaaatgttgaagatgggtattaagaagaaagacgttgta gccatccacgatgataaatcaccaaattggttgttctacacgtttggggcacagatgtgcggagcatggcctcttcattt ctactttcaacgaaacgatggctcagatgttctgcaatacttaaggaaagtgggtgtaaggctaaaaccagaaattttaa gatatggtttaaccttcgatgacattagtccttcatcagaaaaagaattacctgaagttgaacccgaagatgttgccgca attttctgctcgtctggttcaacaggaccaccgaaactgattccatggaaccatcacaacttgatcaatacaaacgtgtc gatcatcgaagcagctgggattaagaacgatgaatccattttttgtccaaggacattcggttgggttggtggatatccaa gggagcttttcatcggcatgccaagggtaactaactccacaacattcaaagagcaaaatgtaaaagacatagctgatgct accgtcaagatcgtcaaccaagaaaatgcaagcatgttgttcttttctcgtctactgttgatgagctgttga |
|
Protein
| Protein ID | pfu_aug2.0_401.1_04119.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_401.1_04119.t1 MYKFSNKKRSYLSTPWTLNTSYCTIPERLRLIGKQNPDKEALIFVGEKHRTSVTYKEVVDGSTIISRKMLKMGIKKKDVV AIHDDKSPNWLFYTFGAQMCGAWPLHFYFQRNDGSDVLQYLRKVGVRLKPEILRYGLTFDDISPSSEKELPEVEPEDVAA IFCSSGSTGPPKLIPWNHHNLINTNVSIIEAAGIKNDESIFCPRTFGWVGGYPRELFIGMPRVTNSTTFKEQNVKDIADA TVKIVNQENASMLFFSRLLLMSC |
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