Gene
| Gene Model ID | pfu_aug2.0_401.1_04121 |
|---|---|
| Locus | scaffold401.1 : 329491 ... 330974 : + |
| To GenomeBrowser | scaffold401.1:329491..330974 |
| Genes list of scaffold | scaffold401.1 |
| Synonym | pfu_aug1.0_13365.1_17993 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| acyl- synthetase | GO:0003824 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_401.1_04121.t1 | 1 | 1 | AMP-binding | 27 | 235 | 1.4e-28 | 99.4 | 3.3e-32 | 1.6e-28 | 99.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_401.1_04121.t1 | gi|504481839|ref|WP_014668941.1| | long-chain fatty acid--CoA ligase [Streptomyces hygroscopicus] | 2.0e-19 |
| pfu_aug2.0_401.1_04121.t1 | gi|156043137|ref|XP_001588125.1| | hypothetical protein SS1G_10571 [Sclerotinia sclerotiorum 1980] | 2.0e-18 |
| pfu_aug2.0_401.1_04121.t1 | gi|499936034|ref|WP_011616768.1| | acyl-CoA synthetase [Cupriavidus necator] | 2.0e-18 |
| pfu_aug2.0_401.1_04121.t1 | gi|636625113|ref|XP_008043691.1| | phenylacetyl-CoA ligase [Trametes versicolor FP-101664 SS1] | 3.0e-18 |
Transcript
| Transcript ID | pfu_aug2.0_401.1_04121.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_401.1_04121.t1 atgattccatggagtcacacaaactcgatagttttagctatgtctcattttgaaggactcggaatcaaagaaggtgggtc atacttttgtgacagggcatttagctggatagttggatatccaagagaaatatttattggcgtaaggagggtgaccaact caacatcatttcaagagaaaagtataagagaggtatgtttgagaacagtgaagatcataaatcaggaaaattgtgaacat gttgttctgtactcaactactatagatgagctcatgaaagataactataagatgagacccgtacaaacgattacaacggg tgggggaccaatatcagcaaaaggttcacagttagtcggaaggttttgtcaaaaatttatcaattcatatggatcgactg aaaatggagctatatcactgaatgtcataactcttgagcagaagatgaaaagctatgacacgggagcaccgttccctggt atagaggtaaaggtcacagacattaacggttgtttgtctgaagtgggagatgttggggaagtgtatgtcagaaataggtt tggctccacggggtatataaataaggaacaagactggcataaagctagcagagtcgaaggatactggttcaaaactggtg attctgggtacatatcggaagatggccatctttttgtcgcaggtcgcataagtgagtcgataatgattgagggaaagata ttatctccttcacattttgaagacgtattcaagagacatccttgtcttgaggaagtggtggcttttggaattccagatga cgtattttatgaagtagcgggtattgcagttacagttaaggaatga |
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Protein
| Protein ID | pfu_aug2.0_401.1_04121.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_401.1_04121.t1 MIPWSHTNSIVLAMSHFEGLGIKEGGSYFCDRAFSWIVGYPREIFIGVRRVTNSTSFQEKSIREVCLRTVKIINQENCEH VVLYSTTIDELMKDNYKMRPVQTITTGGGPISAKGSQLVGRFCQKFINSYGSTENGAISLNVITLEQKMKSYDTGAPFPG IEVKVTDINGCLSEVGDVGEVYVRNRFGSTGYINKEQDWHKASRVEGYWFKTGDSGYISEDGHLFVAGRISESIMIEGKI LSPSHFEDVFKRHPCLEEVVAFGIPDDVFYEVAGIAVTVKE |
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