Gene
| Gene Model ID | pfu_aug2.0_402.1_07458 |
|---|---|
| Locus | scaffold402.1 : 67596 ... 81010 : + |
| To GenomeBrowser | scaffold402.1:67596..81010 |
| Genes list of scaffold | scaffold402.1 |
| Synonym | pfu_aug1.0_13020.1_03300 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| uncharacterized protein loc100373878 | GO:0006464 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_402.1_07458.t1 | 1 | 1 | TTL | 62 | 335 | 0.0 | 270.2 | 0.0 | 0.0 | 269.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_402.1_07458.t1 | gi|260790583|ref|XP_002590321.1| | hypothetical protein BRAFLDRAFT_279373 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_402.1_07458.t1 | gi|260790591|ref|XP_002590325.1| | hypothetical protein BRAFLDRAFT_279376 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_402.1_07458.t1 | gi|676474991|ref|XP_009060326.1| | hypothetical protein LOTGIDRAFT_106043, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_402.1_07458.t1 | gi|291237230|ref|XP_002738538.1| | PREDICTED: uncharacterized protein LOC100373878 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_402.1_07458.t1 | gi|524895093|ref|XP_005104034.1| | PREDICTED: tubulin polyglutamylase TTLL13-like isoform X1 [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_402.1_07458.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_402.1_07458.t1 atgagcgacaagcagaaagccatagtgttccggctcaatgaccatggccagggtccagagattctacgtcaggtcttcct ggagcgaggctggatggagtttaatgaagatgaacaggaggatcatgattggaatatctggtggaggacatcacggttca ggaactgtgactatgacaacatatatccatggcaacggctgaatcattatccaaaatctactggtatcaccaaaaaagat tgcctggcgcgtaatctgaaacgaatgaaaggtgtacatggtgcaggagtgtataattttagtcctatctcatttaatct acctaatgattacaccagatttgtcgctgagtatagtaaaaataagcaaaatgagaacaaaaatttgctgtggatttgta aaccagctgatcagtctaggggtagaggaatcttcatattcagggatatctccagtcttcaatatgactgcactgctgtc ttacaaaaatacatcactaacccactgctgattggaggatataagtttgatgtcaggatctatgtggctgttccgtcatt tcatccattgactgtctatgtatatcaggagggcattgtcagatttggtactgagaaatttgaccttaatgcactcaaca atgtttttgctcatttgacaaacacctctatcaacaagcatggtccagcctatacattagacaaagaaaggataggagcc ggttgtaaatggaccattacacaacttcgttattactttcaccaaaatcacatagatgataacatattatggattagaat cgtcaatatcatcgtactgactctacttattcaagccccacaagtgccaaaatttcataactgctttgaactttatggtt ttgacattcttatcgatgaaaatctgaaaccttggttgctggaggtgaacttcagtccagctttaagttccgattgtcaa acggatttgatcgtgaagaaaccgcttcttcatgacgtcatggacctcatgaacttcaaagaggcagacaaagatcgtgg aattaatatacttgggcaaatgacatcgaggaggaaggcccctgacacggatagatactcgtctgtaagtagaactggga ggaattcagcgttgaacagaagtgcagccaatttccagaagagtatgaccaacctcagcaaacagccgagcattgtgcaa gaaagcacatcgtacatagaacaagaaatggaatgtcacaaaattaaggatgaggagaaaatgtgttacggattgcctct cgtaaaccccgccgacgacgacaaacggccgtctagcgctagttcgggagtgtccagngccaatttccagaagagtatga ccaacctcagcaaacagccgagcattgtgcaagaaagcacatcgtacatagaacaagaaatggaatgtcacaaaattaag gatgaggagaaaatgtgttacggattgcctctcgtaaaccccgccgacgacgacaaacggccgtctagcgctagttcggg agtgtccagcgccaatagtgaaaaactggacactgtagattcagacttagaaacgtcacgttgtaagtctgctgcgccca aaagcagcaggaaaatgcgacgtgaatcctcgcgcgtgtcgctgacgtctctgaatcgaaagcgagaaggagtgtcaagt gctagaggacgcatgacgcctattgatgtcaataataatcagccagtaaaacaggcggtagtgcatacgtcagttggtcc gatcaaaactagtatagagagacaaactactacactttcatctatagaaagagctcaaagagctgaaaaacaatcaatta aaagttcttcaactactgacagtgcaatatctagttatgcgggatctggtagcgagaattctgatctcatatcactgcca gaagattcgcgtacacaattcagtggtaagctagtcagtaacaaacgacggacaagttacacttacggacagacagtcat ggagacagccgtaccgacgttgcccgtcactcagtcagcaaacaacataaaatcgctccgtcctaacggtaattctaatg cgctcagaaagatttcctctcttggaaacatcaccccagctcctgctcccttccctgcaaggagtcagagccgcatgacg caggggagagtcataaatggaagtatttcatctcgagagacgacgcgtatgaaatatcagtcggctgctggactgccgac aggaagggctagtcgtgctagagtaagcatgcctgataagttacctgtcaaccccagggaatctatgtctagtcctaaac aacaaaccccaagtctgaggagaaacaatcagacaaacaaagaatctggtacagctagcaggcggggattcaatacttca aggttcaattccaaaagcagactacagacccttagccaactagataagccaaaaatcaaaggtcccccatcgaggatagg gaatttttatctcgttttccctttcaatgagacatcctataggaccgcaaatgctagtttggatccacatatagttatca aagaatgtcagaaacttttgcgggaagcactgcatgctgagaaatcgacatctgagaaaaggatgggaggacatttacca tttggtgccaaagaagacacagaacgggagagattatggccccctgtcaaaccacctcccgctgaggaaagttga |
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Protein
| Protein ID | pfu_aug2.0_402.1_07458.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_402.1_07458.t1 MSDKQKAIVFRLNDHGQGPEILRQVFLERGWMEFNEDEQEDHDWNIWWRTSRFRNCDYDNIYPWQRLNHYPKSTGITKKD CLARNLKRMKGVHGAGVYNFSPISFNLPNDYTRFVAEYSKNKQNENKNLLWICKPADQSRGRGIFIFRDISSLQYDCTAV LQKYITNPLLIGGYKFDVRIYVAVPSFHPLTVYVYQEGIVRFGTEKFDLNALNNVFAHLTNTSINKHGPAYTLDKERIGA GCKWTITQLRYYFHQNHIDDNILWIRIVNIIVLTLLIQAPQVPKFHNCFELYGFDILIDENLKPWLLEVNFSPALSSDCQ TDLIVKKPLLHDVMDLMNFKEADKDRGINILGQMTSRRKAPDTDRYSSVSRTGRNSALNRSAANFQKSMTNLSKQPSIVQ ESTSYIEQEMECHKIKDEEKMCYGLPLVNPADDDKRPSSASSGVSXANFQKSMTNLSKQPSIVQESTSYIEQEMECHKIK DEEKMCYGLPLVNPADDDKRPSSASSGVSSANSEKLDTVDSDLETSRCKSAAPKSSRKMRRESSRVSLTSLNRKREGVSS ARGRMTPIDVNNNQPVKQAVVHTSVGPIKTSIERQTTTLSSIERAQRAEKQSIKSSSTTDSAISSYAGSGSENSDLISLP EDSRTQFSGKLVSNKRRTSYTYGQTVMETAVPTLPVTQSANNIKSLRPNGNSNALRKISSLGNITPAPAPFPARSQSRMT QGRVINGSISSRETTRMKYQSAAGLPTGRASRARVSMPDKLPVNPRESMSSPKQQTPSLRRNNQTNKESGTASRRGFNTS RFNSKSRLQTLSQLDKPKIKGPPSRIGNFYLVFPFNETSYRTANASLDPHIVIKECQKLLREALHAEKSTSEKRMGGHLP FGAKEDTERERLWPPVKPPPAEES |
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